Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-1170P-201ENST00000515974 106 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 RNA5SP290-201ENST00000517133 127 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 UTP23-205ENST00000520733 369 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AP001825.1-201ENST00000534275 351 ntTSL 2 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 IMMP1LP2-201ENST00000552954 492 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL121821.2-201ENST00000556081 394 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AP006219.1-201ENST00000580258 472 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL670379.10-201ENST00000604330 253 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC106900.2-201ENST00000604994 317 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL670379.9-201ENST00000605428 253 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC022149.2-201ENST00000621061 203 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AL031601.2-202ENST00000622650 282 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 EYS-204ENST00000370621 10485 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 AC103988.1-201ENST00000566382 2177 ntBASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 KLRA1P-202ENST00000510134 1410 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC3.52□□□□□ -1.85
SSX2IPQ9Y2D8 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC091534.1-201ENST00000548779 1751 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 MIR422A-201ENST00000362286 90 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RNA5SP197-201ENST00000363357 119 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-266P-201ENST00000364225 107 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RNU1-140P-201ENST00000365040 165 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 SPRR2E-201ENST00000368750 678 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AL138885.1-201ENST00000405921 675 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC010967.2-201ENST00000418451 333 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 TRAPPC2P4-201ENST00000421750 331 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AL359672.1-201ENST00000442302 409 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC087884.1-201ENST00000469738 328 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 ATP1B3-AS1-201ENST00000492725 376 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 ENSA-210ENST00000503241 574 ntTSL 3 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 MTND3P25-201ENST00000509243 135 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RNU1-61P-201ENST00000516107 151 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RNA5SP341-201ENST00000516261 117 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 AC002044.1-201ENST00000606707 158 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 SNORD39.4-201ENST00000620099 78 ntBASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.51□□□□□ -1.85
SSX2IPQ9Y2D8 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-214P-201ENST00000384130 107 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 Y_RNA.482-201ENST00000384377 111 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-1179P-201ENST00000384667 107 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU4-14P-201ENST00000410858 122 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-607P-201ENST00000411283 108 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AL353621.1-201ENST00000418219 243 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU7-138P-201ENST00000459479 64 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC026801.1-201ENST00000497178 464 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU1-103P-201ENST00000516502 125 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-1332P-201ENST00000516666 104 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 Y_RNA.718-201ENST00000517110 102 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC107934.2-201ENST00000518653 310 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AP003122.3-201ENST00000526316 255 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC084851.1-201ENST00000529105 249 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AP002404.1-201ENST00000532005 451 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 TRAV28-201ENST00000557548 323 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 LRRC37A5P-203ENST00000580181 585 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC100830.2-201ENST00000581636 240 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC084781.2-201ENST00000615568 161 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AL359757.2-201ENST00000624309 274 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AL035425.3-201ENST00000564206 4996 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AL359693.1-201ENST00000614959 2407 ntBASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.5□□□□□ -1.85
SSX2IPQ9Y2D8 AC007785.2-201ENST00000598627 1916 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-593P-201ENST00000364716 112 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-1303P-201ENST00000364841 107 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 RNU1-101P-201ENST00000391171 127 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 MTCYBP4-201ENST00000401524 249 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 RNU6-1025P-201ENST00000410629 104 ntBASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.49□□□□□ -1.85
SSX2IPQ9Y2D8 PIGFP3-201ENST00000441918 722 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms