Protein–RNA interactions for Protein: Q9UI33

SCN11A, Sodium channel protein type 11 subunit alpha, humanhuman

Predictions only

Length 1,791 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN11AQ9UI33 C1DP1-201ENST00000426049 402 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 NDUFA5P10-201ENST00000432147 357 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 MTCO3P5-201ENST00000433620 714 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC097499.1-201ENST00000444277 208 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 ZNF736P6Y-201ENST00000447526 1213 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC092757.1-201ENST00000467293 467 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC104692.1-201ENST00000472406 90 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AL359314.1-201ENST00000616913 261 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AC073569.3-201ENST00000619055 682 ntBASIC0.3□□□□□ -2.36
SCN11AQ9UI33 AL139098.1-201ENST00000407291 389 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 Z95118.1-201ENST00000421372 247 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 TAAR7P-201ENST00000436141 242 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 DDX3P2-201ENST00000446138 111 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 TSPY5P-202ENST00000456541 142 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 NUCB2-202ENST00000458064 1279 ntTSL 1 (best) BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 RNU6-1095P-201ENST00000516148 108 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 RNU4-54P-201ENST00000516428 129 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 MIR3937-201ENST00000580135 106 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AL022345.2-201ENST00000606307 135 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AC006213.4-201ENST00000616184 634 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 RNU6-414P-201ENST00000363705 104 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 USP9YP19-201ENST00000412165 485 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 USP9YP13-201ENST00000417797 480 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AC024082.2-201ENST00000434771 238 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 MTND4P6-201ENST00000438297 472 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AL358794.1-201ENST00000445689 381 ntBASIC0.29□□□□□ -2.36
SCN11AQ9UI33 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.29□□□□□ -2.36
SCN11AQ9UI33 Y_RNA.549-201ENST00000384657 102 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 DSTNP4-201ENST00000399472 474 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN11AQ9UI33 MTND1P16-201ENST00000465177 898 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 AC002350.1-201ENST00000490759 375 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 RPL22P13-201ENST00000493291 347 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.28□□□□□ -2.36
SCN11AQ9UI33 LINC02233-201ENST00000513718 358 ntTSL 3 BASIC0.28□□□□□ -2.36
SCN11AQ9UI33 RNU4ATAC10P-201ENST00000516967 122 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 Z83818.1-201ENST00000603584 150 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 ANKRD30BP1-201ENST00000451052 2186 ntBASIC0.28□□□□□ -2.36
SCN11AQ9UI33 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 SNORD18A-201ENST00000363753 72 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 RNA5SP368-201ENST00000364298 116 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 COX6CP6-201ENST00000490840 228 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 SNORD19.2-201ENST00000516978 73 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AC124293.1-201ENST00000530034 493 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AL049870.4-201ENST00000555741 486 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AC002400.1-201ENST00000569310 726 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AL161729.4-201ENST00000604650 476 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 FTX_3.1-201ENST00000610451 147 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AC024581.2-201ENST00000619986 252 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 RNU1-58P-201ENST00000362413 163 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 SNORA4.3-201ENST00000365564 137 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 RNU6-730P-201ENST00000383954 104 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 AL583803.1-201ENST00000454262 334 ntTSL 3 BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 RPL31P53-201ENST00000457065 348 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC0.27□□□□□ -2.37
SCN11AQ9UI33 ELOCP5-201ENST00000604924 333 ntBASIC0.27□□□□□ -2.37
SCN11AQ9UI33 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.26□□□□□ -2.37
SCN11AQ9UI33 RNU6-251P-201ENST00000363235 104 ntBASIC0.26□□□□□ -2.37
SCN11AQ9UI33 RNU6-360P-201ENST00000390944 104 ntBASIC0.26□□□□□ -2.37
SCN11AQ9UI33 AC010631.1-201ENST00000474150 156 ntBASIC0.26□□□□□ -2.37
SCN11AQ9UI33 AC068790.6-201ENST00000602558 258 ntBASIC0.26□□□□□ -2.37
SCN11AQ9UI33 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.25□□□□□ -2.37
SCN11AQ9UI33 RNU6-758P-201ENST00000516292 89 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC125611.1-201ENST00000549563 229 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC018659.1-201ENST00000551083 169 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AL589743.7-201ENST00000612637 233 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AL138726.1-201ENST00000614873 333 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AC090772.4-201ENST00000623599 362 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 AP003072.5-201ENST00000623872 773 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 MTND4P8-201ENST00000514997 1362 ntBASIC0.25□□□□□ -2.37
SCN11AQ9UI33 SNORD114-15-201ENST00000364687 72 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AL592447.1-201ENST00000447592 540 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC245102.2-201ENST00000448956 180 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 AC104629.2-201ENST00000468627 598 ntBASIC0.24□□□□□ -2.37
SCN11AQ9UI33 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC0.24□□□□□ -2.37
SCN11AQ9UI33 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.24□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms