Protein–RNA interactions for Protein: Q9UBP4

DKK3, Dickkopf-related protein 3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DKK3Q9UBP4 RNU6-143P-201ENST00000516942 93 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC069113.1-201ENST00000517763 267 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC022634.1-201ENST00000520765 532 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC026333.2-201ENST00000542164 106 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MIR1273C-201ENST00000578669 77 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MIR548AC-201ENST00000585049 88 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC002545.1-201ENST00000592511 181 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC098826.3-201ENST00000603823 466 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AL161798.1-201ENST00000604630 131 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AL355802.3-201ENST00000607571 545 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC133104.2-201ENST00000615272 193 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 ATP5A1P2-202ENST00000616464 443 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC068631.1-219ENST00000625826 668 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 LUZP2-208ENST00000620308 4981 ntTSL 5 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 AC068647.1-201ENST00000489539 2265 ntBASIC3.5□□□□□ -1.85
DKK3Q9UBP4 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.5□□□□□ -1.85
DKK3Q9UBP4 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNORD3E-201ENST00000362899 217 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 Y_RNA.112-201ENST00000363250 102 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNU1-33P-201ENST00000364249 162 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNORA63C-201ENST00000364578 129 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 CD24P4-201ENST00000382840 243 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNU6-214P-201ENST00000384130 107 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 Y_RNA.445-201ENST00000384168 102 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 MIR490-201ENST00000384865 128 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNORA75.4-201ENST00000391278 119 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNA5SP293-201ENST00000410527 113 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AL592435.1-201ENST00000416401 469 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AL353621.1-201ENST00000418219 243 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RPL27AP8-201ENST00000424277 446 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 C1orf195-201ENST00000424792 255 ntTSL 2 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC097713.2-201ENST00000430199 356 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 LINC01683-201ENST00000443479 412 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNU7-138P-201ENST00000459479 64 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC025518.1-201ENST00000479856 347 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC132825.2-201ENST00000483901 504 ntTSL 5 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC008716.1-201ENST00000511084 513 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNORA31.1-201ENST00000515993 133 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNORA31.5-201ENST00000516190 133 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNA5SP471-201ENST00000516971 106 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 RNU6-1315P-201ENST00000517187 99 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC026371.1-201ENST00000551867 419 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SNRPGP18-201ENST00000553000 214 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 MIR4506-201ENST00000584693 77 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC006557.5-201ENST00000603126 811 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC002044.1-201ENST00000606707 158 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AP002826.1-201ENST00000608835 315 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AL031601.2-202ENST00000622650 282 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 uc_338.22-201ENST00000622722 187 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 AC244517.12-201ENST00000623581 663 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 Z99571.1-201ENST00000636677 394 ntBASIC3.49□□□□□ -1.85
DKK3Q9UBP4 SYNE2-212ENST00000554584 20508 ntTSL 5 BASIC3.49□□□□□ -1.85
DKK3Q9UBP4 MUC15-201ENST00000281268 2968 ntTSL 5 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC103988.1-201ENST00000566382 2177 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 RNA5SP267-201ENST00000364893 126 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 SNORA33.2-201ENST00000365413 134 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 RNU6-1160P-201ENST00000384546 104 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 RNU6-95P-201ENST00000384697 107 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 RNU6-1304P-201ENST00000411374 106 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 Z85995.1-201ENST00000415547 335 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 UBE2V1P4-201ENST00000425374 344 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AL592045.1-201ENST00000429867 352 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AL137792.2-201ENST00000443484 235 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 MRPS31P2-201ENST00000451581 518 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 MTCO3P10-201ENST00000455912 772 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 BX510359.1-201ENST00000456973 237 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC022445.1-201ENST00000457499 408 ntTSL 3 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 RNA5SP310-201ENST00000459084 116 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AP001486.1-201ENST00000463339 476 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC097473.1-201ENST00000508142 408 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC096745.1-201ENST00000509945 370 ntBASIC3.48□□□□□ -1.85
DKK3Q9UBP4 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC3.48□□□□□ -1.85
DKK3Q9UBP4 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 140.2 ms