Protein–RNA interactions for Protein: Q9NXS3

KLHL28, Kelch-like protein 28, humanhuman

Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHL28Q9NXS3 AC096920.1-201ENST00000423991 241 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP30-201ENST00000432419 501 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 HMGN2P3-201ENST00000433603 273 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 HMGN2P5-201ENST00000436882 273 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP6-201ENST00000446637 472 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 MED28P2-201ENST00000475771 317 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC108752.1-201ENST00000484679 576 ntTSL 5 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC112204.1-201ENST00000502591 103 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC243960.4-201ENST00000600532 288 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 NDUFA8P1-201ENST00000605525 367 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC018638.7-201ENST00000605836 1114 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 AC008121.3-201ENST00000618726 433 ntBASIC1.92□□□□□ -2.1
KLHL28Q9NXS3 MLIP-AS1-201ENST00000434196 1534 ntTSL 2 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 ASPM-202ENST00000367408 3747 ntTSL 1 (best) BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 SNORD114-19-201ENST00000363072 75 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL079342.1-201ENST00000401460 267 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL023284.1-201ENST00000403956 276 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL356432.1-201ENST00000405809 419 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 GSTA9P-201ENST00000406231 611 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 SRIP2-201ENST00000428470 166 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL591719.1-201ENST00000444669 744 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP7-203ENST00000449021 469 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 RPL23AP3-201ENST00000453844 468 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC010976.1-211ENST00000454503 644 ntTSL 2 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL583843.1-201ENST00000456070 346 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC018868.1-201ENST00000491307 315 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 RNU7-51P-201ENST00000516560 62 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC025871.1-201ENST00000523935 443 ntTSL 2 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 MTND4LP18-201ENST00000526864 291 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 OR5B19P-201ENST00000531766 928 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC091489.2-201ENST00000566263 604 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC092325.1-201ENST00000566449 554 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC025678.1-201ENST00000567861 338 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 MIR4299-201ENST00000577899 72 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 MIR4769-201ENST00000584126 77 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC012594.1-269ENST00000600489 628 ntTSL 5 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AP002360.4-201ENST00000606980 481 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC024940.5-201ENST00000622889 474 ntBASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 ANKAR-201ENST00000313581 4391 ntAPPRIS P1 TSL 1 (best) BASIC1.91□□□□□ -2.1
KLHL28Q9NXS3 CEP162-201ENST00000257766 5063 ntTSL 1 (best) BASIC1.9□□□□□ -2.1
KLHL28Q9NXS3 RNU6-858P-201ENST00000362436 107 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP160-201ENST00000364866 120 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL591034.2-201ENST00000402839 359 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL365338.1-201ENST00000422282 858 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL591806.2-201ENST00000433122 173 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 RPL21P99-201ENST00000480369 423 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 HMGB3P17-201ENST00000504195 649 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AC034114.1-201ENST00000520293 285 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 OR5AL2P-201ENST00000532185 920 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AC135279.1-201ENST00000543493 504 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AL109918.3-201ENST00000603072 338 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 AC092192.1-201ENST00000633154 1018 ntBASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 LINC01938-201ENST00000521341 1864 ntTSL 2 BASIC1.9□□□□□ -2.11
KLHL28Q9NXS3 RBBP8P1-201ENST00000449447 1844 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 FSD1L-201ENST00000374707 7062 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MIR412-201ENST00000362142 91 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNU6-1010P-201ENST00000362757 107 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNU1-23P-201ENST00000363361 144 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP138-201ENST00000365098 114 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNU6-533P-201ENST00000384144 107 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNU1-57P-201ENST00000384491 166 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 Y_RNA.623-201ENST00000411128 95 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC098592.1-201ENST00000419352 333 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 ATP6V0E1P3-201ENST00000420036 246 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC011233.1-201ENST00000422812 283 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC008267.5-201ENST00000424928 265 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC073641.1-201ENST00000425192 429 ntTSL 3 BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC073342.1-202ENST00000446192 457 ntTSL 5 BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 CSN1S2AP-201ENST00000451783 779 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC068587.2-201ENST00000478386 781 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 HMGB1P35-201ENST00000503360 598 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 RNA5SP337-201ENST00000517007 109 ntBASIC1.89□□□□□ -2.11
KLHL28Q9NXS3 AC109329.1-201ENST00000518744 317 ntBASIC1.89□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 84.2 ms