Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.670-201ENST00000516255 105 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 ACA59.2-201ENST00000517061 156 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 LINC02277-201ENST00000553386 453 ntTSL 2 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 LINC02309-201ENST00000553679 207 ntTSL 3 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AC087499.8-201ENST00000578406 226 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 MIR5187-201ENST00000583479 76 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 VN1R107P-201ENST00000601784 209 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 AL591034.3-201ENST00000605511 685 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 SPTY2D1-AS1-205ENST00000635674 450 ntAPPRIS ALT2 TSL 2 BASIC3.56□□□□□ -1.84
MKS1Q9NXB0 MIR7153-201ENST00000637758 57 ntBASIC3.56□□□□□ -1.84
MKS1Q9NXB0 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 RNU6-527P-201ENST00000363425 104 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.473-201ENST00000384333 102 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 TRAJ16-201ENST00000390521 60 ntAPPRIS P1 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 SNORA75.4-201ENST00000391278 119 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL513475.1-201ENST00000406602 315 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC006159.2-201ENST00000421965 692 ntTSL 2 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC006946.1-201ENST00000429106 328 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL133396.1-201ENST00000432048 687 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL136369.1-201ENST00000437825 244 ntTSL 5 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL390067.1-201ENST00000440009 420 ntTSL 3 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 FTH1P25-201ENST00000447665 469 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.653-201ENST00000459091 95 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 U8.21-201ENST00000459536 136 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 MED28P2-201ENST00000475771 317 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 RN7SL323P-201ENST00000494712 295 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 LINC02155-201ENST00000519215 407 ntTSL 5 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC025281.1-201ENST00000567026 265 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC009163.5-201ENST00000575421 637 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC044792.1-201ENST00000593294 196 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC009229.3-201ENST00000608056 282 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC083809.1-201ENST00000615051 472 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 DLEU2_5.1-201ENST00000615567 84 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 PISRT1.1-201ENST00000616930 107 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 TMEM212-205ENST00000619900 585 ntAPPRIS P1 TSL 3 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 FP236240.3-201ENST00000623061 327 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AL669831.3-213ENST00000636676 183 ntBASIC3.55□□□□□ -1.84
MKS1Q9NXB0 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.55□□□□□ -1.84
MKS1Q9NXB0 AC019117.3-201ENST00000637807 3523 ntAPPRIS P1 TSL 5 BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 IBTK-209ENST00000510291 4109 ntTSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC004944.1-201ENST00000517807 3059 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 SNORA70.2-201ENST00000364506 135 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 Y_RNA.315-201ENST00000365117 102 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 RNU1-64P-201ENST00000365443 163 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 RNU6-750P-201ENST00000390946 107 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC096649.2-201ENST00000416186 393 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AL591043.1-201ENST00000432461 424 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC236972.1-201ENST00000433225 199 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 MAMDC2-AS1-205ENST00000451488 317 ntTSL 3 BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 RNU7-152P-201ENST00000458982 64 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 RN7SL385P-201ENST00000468873 276 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 LINC02374-202ENST00000515222 578 ntTSL 4 BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 SNORA31.9-201ENST00000516429 84 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 MIR2276-201ENST00000516886 89 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 RNU6-1213P-201ENST00000517075 94 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC104237.1-201ENST00000527443 539 ntTSL 4 BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC011494.1-201ENST00000596454 237 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AL356055.1-201ENST00000602528 446 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC091152.3-201ENST00000604227 325 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC018889.1-201ENST00000605372 397 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC097372.5-201ENST00000623665 376 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 CCDC141-202ENST00000409284 6960 ntAPPRIS P2 TSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 AC010889.1-201ENST00000566193 2666 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 FIGNL1-203ENST00000419119 3700 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
MKS1Q9NXB0 ZNF736P3Y-201ENST00000428264 1465 ntBASIC3.54□□□□□ -1.84
MKS1Q9NXB0 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNU6-1059P-201ENST00000363752 98 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC068538.1-201ENST00000376856 336 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 SNORA70C-201ENST00000384538 135 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNA5SP317-201ENST00000410176 116 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNA5SP311-201ENST00000411290 116 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC074117.2-201ENST00000417130 397 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AL669831.2-201ENST00000422528 456 ntTSL 5 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 PTGES3P4-201ENST00000426243 356 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AL133162.1-201ENST00000463228 453 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC008571.1-201ENST00000467232 300 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RPL7P42-201ENST00000481005 679 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AKIRIN2P1-201ENST00000505898 352 ntBASIC3.53□□□□□ -1.84
MKS1Q9NXB0 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC3.53□□□□□ -1.84
MKS1Q9NXB0 RNU4ATAC7P-201ENST00000516280 125 ntBASIC3.53□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms