Protein–RNA interactions for Protein: Q9NP77

SSU72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, humanhuman

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72Q9NP77 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC018529.3-201ENST00000624212 2254 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 LINC02471-203ENST00000641941 4752 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 MS4A14-201ENST00000300187 2997 ntAPPRIS P3 TSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR331-201ENST00000362302 94 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 Y_RNA.170-201ENST00000363746 110 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 RNU6-879P-201ENST00000364328 108 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 SNORD32A-201ENST00000364805 84 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 RNU6-843P-201ENST00000384454 104 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR487A-201ENST00000385009 80 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR325-201ENST00000385260 98 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 SNORD12B-201ENST00000410433 91 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC146944.2-203ENST00000502493 354 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC139495.1-202ENST00000513164 354 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR2114-201ENST00000516645 80 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 RNA5SP143-201ENST00000516936 115 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 RNU2-31P-201ENST00000516954 155 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC027288.2-201ENST00000553028 243 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC4.14□□□□□ -1.75
SSU72Q9NP77 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC4.14□□□□□ -1.75
SSU72Q9NP77 Z83818.1-201ENST00000603584 150 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 AC113403.1-201ENST00000604910 193 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 SNORD113-5-201ENST00000607261 78 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 AL133243.3-201ENST00000617415 3004 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 Z73965.1-201ENST00000623412 2297 ntBASIC4.14□□□□□ -1.75
SSU72Q9NP77 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
SSU72Q9NP77 C4BPAP1-201ENST00000415474 1893 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSU72Q9NP77 FTLP6-201ENST00000355274 422 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 RNU5B-2P-201ENST00000363036 113 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 RNU6-527P-201ENST00000363425 104 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 Y_RNA.446-201ENST00000384178 104 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 SNORA29-201ENST00000384183 140 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 U8.10-201ENST00000384260 133 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 AC096638.1-201ENST00000444678 216 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 TEX41-209ENST00000451478 452 ntTSL 2 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 AC087477.1-201ENST00000465747 340 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 RPL23AP49-201ENST00000492925 468 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 AC097501.2-201ENST00000502668 305 ntTSL 5 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 RNU6-1114P-201ENST00000516022 107 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 AL162424.1-201ENST00000602325 221 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 AC109462.4-201ENST00000637882 581 ntTSL 5 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 AC008568.2-201ENST00000623862 2313 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSU72Q9NP77 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC4.13□□□□□ -1.75
SSU72Q9NP77 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC4.13□□□□□ -1.75
SSU72Q9NP77 OR56B2P-202ENST00000641377 2453 ntBASIC4.13□□□□□ -1.75
SSU72Q9NP77 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC4.13□□□□□ -1.75
SSU72Q9NP77 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC118273.1-201ENST00000525324 3006 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 AL359854.1-201ENST00000614203 1594 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNU6-898P-201ENST00000365627 104 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNA5SP87-201ENST00000384155 118 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNU6-281P-201ENST00000384212 103 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNU6-140P-201ENST00000384566 108 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 MIR10B-201ENST00000385011 110 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 HMGN2P8-201ENST00000391458 268 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNA5SP44-201ENST00000410446 133 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 FAR2P2-201ENST00000413041 594 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 MTATP6P29-201ENST00000415057 132 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RPL23AP95-201ENST00000426806 265 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 PSMD10P3-201ENST00000437000 448 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RPL23AP52-201ENST00000439311 478 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 NUTF2P7-201ENST00000453086 375 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC073901.1-201ENST00000462471 408 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 RN7SL93P-201ENST00000463035 293 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC083982.1-201ENST00000485679 344 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 MRPL42P6-201ENST00000486397 371 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC093909.2-201ENST00000505178 437 ntTSL 3 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC011396.2-202ENST00000511390 375 ntTSL 3 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 RNU7-143P-201ENST00000516781 65 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AK6P2-201ENST00000549020 471 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 LINC00933-203ENST00000559812 219 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 H3F3AP1-201ENST00000559984 334 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 LINC02168-201ENST00000565327 352 ntTSL 2 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 FAM27D1-201ENST00000612308 341 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC068870.2-201ENST00000620635 389 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 AC018793.1-201ENST00000638166 585 ntAPPRIS P1 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 UBE3AP2-201ENST00000429033 2259 ntBASIC4.12□□□□□ -1.75
SSU72Q9NP77 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.12□□□□□ -1.75
SSU72Q9NP77 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC4.12□□□□□ -1.75
SSU72Q9NP77 AL079305.1-201ENST00000623159 3008 ntBASIC4.11□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 143.2 ms