Protein–RNA interactions for Protein: Q9BYV2

TRIM54, Tripartite motif-containing protein 54, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54Q9BYV2 RNU6-1016P-201ENST00000516689 94 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU1-45P-201ENST00000517191 141 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 RNU6-711P-201ENST00000517255 106 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL163153.1-201ENST00000554223 283 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 MIR4719-201ENST00000585233 84 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL121917.1-203ENST00000605534 577 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 SNORA51-201ENST00000606420 132 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC126177.8-201ENST00000618339 1015 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 CR392039.5-201ENST00000623201 510 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC244517.12-201ENST00000623581 663 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AL034408.1-202ENST00000636088 415 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 AC009093.8-201ENST00000641769 292 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 ZNF826P-207ENST00000622273 1910 ntBASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
TRIM54Q9BYV2 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC006026.1-201ENST00000444025 1803 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 ZNF83-201ENST00000301096 2599 ntAPPRIS P1 TSL 3 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RNU6-78P-201ENST00000362897 107 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.259-201ENST00000364619 101 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RNU6-1280P-201ENST00000365211 107 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RNU6-827P-201ENST00000365553 106 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 MIR218-2-201ENST00000385006 110 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RNU4-14P-201ENST00000410858 122 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RAB9AP3-201ENST00000412737 573 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC093578.1-201ENST00000415219 368 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC245054.2-201ENST00000415639 319 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 DBIP2-201ENST00000419076 262 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC018644.1-201ENST00000429934 551 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC125238.1-201ENST00000448842 249 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RAB9AP1-201ENST00000449393 573 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC009468.2-201ENST00000457372 366 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 RN7SL442P-201ENST00000473804 320 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 HMGN2P13-201ENST00000476476 274 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC018437.1-201ENST00000492214 406 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 SEMA6A-AS1-204ENST00000510682 521 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC023632.4-201ENST00000517783 191 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC093331.1-201ENST00000521474 169 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 TMCO5B-203ENST00000529623 509 ntTSL 4 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC010186.2-204ENST00000537668 439 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC021739.1-201ENST00000559631 174 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 EAF1-AS1-207ENST00000599742 772 ntTSL 5 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC099778.2-201ENST00000610904 211 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 USP12-203ENST00000620323 349 ntTSL 3 BASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AL359757.2-201ENST00000624309 274 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC3.37□□□□□ -1.87
TRIM54Q9BYV2 AC010680.1-201ENST00000590024 3590 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 RNU6-805P-201ENST00000365643 106 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 SNORA48.8-201ENST00000391324 134 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 RN7SKP111-201ENST00000410349 271 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AC126124.2-201ENST00000413542 321 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL117339.3-201ENST00000418733 162 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 ATG3P1-201ENST00000419507 911 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 RPS15AP5-201ENST00000436276 388 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 NIPA2P5-201ENST00000452282 464 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL031183.1-201ENST00000457667 207 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 RNU7-187P-201ENST00000458985 68 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 SNORA84-201ENST00000459229 133 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 SNORD19B-201ENST00000459623 84 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 CENPBD1P1-201ENST00000464061 469 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AK3P2-201ENST00000507976 429 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 FCF1P8-201ENST00000510322 597 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AC020895.1-201ENST00000595362 272 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AC124303.1-201ENST00000605703 360 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL050343.2-201ENST00000607338 280 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AC019193.3-201ENST00000609144 554 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL161423.1-201ENST00000613700 262 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 AL442067.2-201ENST00000614033 363 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 DLEU1_1.1-201ENST00000618107 190 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 LIG4-205ENST00000614526 3884 ntTSL 2 BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 CDC27P3-201ENST00000635418 1910 ntBASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC3.36□□□□□ -1.87
TRIM54Q9BYV2 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC007496.3-201ENST00000624987 3443 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 Y_RNA.813-201ENST00000364639 102 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 RNU6-790P-201ENST00000384479 105 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AL030996.1-201ENST00000411430 235 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC124916.1-201ENST00000444020 547 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 RPL21P23-201ENST00000446654 460 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 PCMTD1P1-201ENST00000455560 355 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 HMGN1P18-201ENST00000457642 277 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 U8.21-201ENST00000459536 136 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 RPL23AP49-201ENST00000492925 468 ntBASIC3.35□□□□□ -1.87
TRIM54Q9BYV2 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC3.35□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms