| PGAP3 | Q96FM1 | RNU6-384P-201 | ENST00000364900 | 104 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | S100A12-201 | ENST00000368737 | 518 nt | APPRIS P1 TSL 1 (best) BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-45P-201 | ENST00000384471 | 107 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | Y_RNA.582-201 | ENST00000391023 | 95 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | GSTA9P-201 | ENST00000406231 | 611 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL096701.2-201 | ENST00000416920 | 238 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL162726.4-201 | ENST00000422010 | 673 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC005009.1-201 | ENST00000423979 | 269 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL359853.2-201 | ENST00000442108 | 353 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC069542.1-201 | ENST00000445235 | 557 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL356010.1-201 | ENST00000456364 | 102 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MGC32805-203 | ENST00000506053 | 652 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC074344.1-201 | ENST00000512823 | 224 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC105417.1-201 | ENST00000514691 | 285 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC004054.1-201 | ENST00000515111 | 270 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC079598.5-201 | ENST00000547460 | 117 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL355076.2-202 | ENST00000553754 | 574 nt | TSL 4 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL132819.1-201 | ENST00000555595 | 208 nt | TSL 3 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MIR5571-201 | ENST00000577998 | 113 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC005154.1-222 | ENST00000579024 | 341 nt | TSL 5 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC025449.1-201 | ENST00000603896 | 529 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC006023.1-201 | ENST00000603944 | 259 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | HOTAIRM1_5.1-201 | ENST00000619311 | 145 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MCMDC2-201 | ENST00000313616 | 2043 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MACC1-202 | ENST00000400331 | 9159 nt | APPRIS P1 TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ANP32E-209 | ENST00000616917 | 2989 nt | TSL 2 BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | HAUS6P2-201 | ENST00000433254 | 2404 nt | BASIC | 2.67 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ZNF680P1-201 | ENST00000436625 | 1469 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ZNF470-202 | ENST00000391709 | 6601 nt | APPRIS P1 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | OXR1-215 | ENST00000531443 | 3599 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | VTRNA1-1-201 | ENST00000363120 | 99 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-1103P-201 | ENST00000384150 | 107 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-1119P-201 | ENST00000384349 | 108 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MIR27B-201 | ENST00000385129 | 97 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | DEFB108C-201 | ENST00000400154 | 252 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU2-29P-201 | ENST00000410423 | 189 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | PGBD4P6-201 | ENST00000421501 | 610 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AL157882.1-201 | ENST00000447148 | 429 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC004936.1-201 | ENST00000451755 | 361 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC131571.1-202 | ENST00000454509 | 598 nt | TSL 4 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RPS3P1-201 | ENST00000456781 | 192 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU7-26P-201 | ENST00000458980 | 63 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC008571.1-201 | ENST00000467232 | 300 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | HMGB1P29-201 | ENST00000505659 | 499 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC074131.1-201 | ENST00000514662 | 253 nt | TSL 2 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | LRRC34P2-201 | ENST00000514850 | 553 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | Y_RNA.687-201 | ENST00000516558 | 91 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RNU6-1178P-201 | ENST00000516674 | 107 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | RPL7P20-201 | ENST00000520308 | 745 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ASPH-224 | ENST00000522603 | 842 nt | TSL 1 (best) BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC021698.1-201 | ENST00000524858 | 716 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | CR383656.8-201 | ENST00000549046 | 145 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MIR4513-201 | ENST00000581077 | 86 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC079610.3-201 | ENST00000606960 | 147 nt | TSL 3 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC022017.1-201 | ENST00000608793 | 559 nt | TSL 4 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC026585.1-201 | ENST00000619582 | 524 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC024581.2-201 | ENST00000619986 | 252 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | SRP54-214 | ENST00000630962 | 162 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ATM-228 | ENST00000639240 | 498 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ATM-230 | ENST00000640388 | 578 nt | TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | CEP70-211 | ENST00000484888 | 1993 nt | APPRIS P3 TSL 5 BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | AC007336.1-201 | ENST00000576365 | 3828 nt | BASIC | 2.66 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | ARHGAP28-204 | ENST00000419673 | 5492 nt | APPRIS P2 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | MCF2-204 | ENST00000414978 | 3813 nt | APPRIS ALT2 TSL 5 BASIC | 2.65 | □□□□□ -1.98 | | |
| PGAP3 | Q96FM1 | PCDH11Y-201 | ENST00000215473 | 4595 nt | APPRIS ALT2 TSL 1 (best) BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | Y_RNA.51-201 | ENST00000362725 | 102 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-942P-201 | ENST00000363002 | 107 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | SNORA38-201 | ENST00000363946 | 132 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-715P-201 | ENST00000365204 | 103 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-843P-201 | ENST00000384454 | 104 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL139095.1-201 | ENST00000404326 | 391 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-607P-201 | ENST00000411283 | 108 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL354733.1-203 | ENST00000417672 | 495 nt | TSL 5 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | ACTR3BP6-201 | ENST00000422332 | 1241 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | LINC01040-201 | ENST00000425048 | 666 nt | TSL 2 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MTCO3P30-201 | ENST00000426425 | 670 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC069540.2-201 | ENST00000441776 | 351 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CALM1P1-201 | ENST00000442082 | 433 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RPL7P12-201 | ENST00000446719 | 750 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC112771.1-201 | ENST00000463581 | 102 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RPS27AP9-201 | ENST00000477681 | 438 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC090096.1-201 | ENST00000489168 | 390 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC106892.1-201 | ENST00000491608 | 406 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AIG1P1-201 | ENST00000503376 | 148 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | MTND3P25-201 | ENST00000509243 | 135 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | LINC02118-202 | ENST00000510583 | 419 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU1-86P-201 | ENST00000516108 | 154 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU1-107P-201 | ENST00000516617 | 154 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RNU6-826P-201 | ENST00000516827 | 104 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | FAM92A-209 | ENST00000519679 | 538 nt | TSL 4 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | ELOCP31-201 | ENST00000540463 | 467 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | CERS3-AS1-201 | ENST00000560643 | 372 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AP005136.1-201 | ENST00000579765 | 429 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC073539.2-201 | ENST00000597113 | 165 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | BNIP3P30-201 | ENST00000601184 | 574 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL589765.7-201 | ENST00000601684 | 629 nt | TSL 3 BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | RPL12P50-201 | ENST00000603116 | 116 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 2.65 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | AL161431.1-201 | ENST00000618966 | 4205 nt | BASIC | 2.64 | □□□□□ -1.99 | | |
| PGAP3 | Q96FM1 | SKIL-203 | ENST00000426052 | 2757 nt | TSL 2 BASIC | 2.64 | □□□□□ -1.99 | | |