Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.55□□□□□ -1.68
ZNF428Q96B54 MTND3P23-201ENST00000431980 347 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 RPS29P31-201ENST00000446147 164 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 MED28P2-201ENST00000475771 317 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 RPL7P43-201ENST00000478876 753 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 MRPL42P6-201ENST00000486397 371 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 AC103851.1-201ENST00000506833 274 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 AC010265.1-201ENST00000513509 211 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC4.55□□□□□ -1.68
ZNF428Q96B54 RAB11AP2-201ENST00000545905 639 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 AC005476.1-201ENST00000554427 397 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 5S_rRNA.12-201ENST00000617631 107 ntBASIC4.55□□□□□ -1.68
ZNF428Q96B54 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC4.55□□□□□ -1.68
ZNF428Q96B54 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ZNF428Q96B54 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
ZNF428Q96B54 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
ZNF428Q96B54 RGS22-214ENST00000523287 4033 ntAPPRIS ALT2 TSL 2 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 RNU6-797P-201ENST00000363101 109 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 RN7SKP158-201ENST00000410453 326 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 AL356124.2-201ENST00000442449 391 ntTSL 5 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 Y_RNA.635-201ENST00000459041 101 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC130509.1-201ENST00000464158 433 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC105029.1-201ENST00000520250 669 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 CKS1BP7-201ENST00000522230 235 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 IMMP1LP2-201ENST00000552954 492 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 MIR4790-201ENST00000577799 79 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 AL160281.1-201ENST00000605307 311 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC018889.1-201ENST00000605372 397 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC010378.1-201ENST00000619270 362 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC024581.2-201ENST00000619986 252 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 AC022149.2-201ENST00000621061 203 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 hsa-mir-4776-1.1-201ENST00000636364 80 ntBASIC4.54□□□□□ -1.68
ZNF428Q96B54 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
ZNF428Q96B54 TMEM67-202ENST00000409623 3255 ntTSL 2 BASIC4.54□□□□□ -1.68
ZNF428Q96B54 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 RNA5SP50-201ENST00000363731 107 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 CRP-203ENST00000368111 512 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 RNU6-933P-201ENST00000384424 107 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AL512633.1-201ENST00000399931 655 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 ARF4P2-201ENST00000430209 526 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC092436.3-201ENST00000511788 257 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 RNU1-54P-201ENST00000517181 120 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC016597.1-201ENST00000564893 528 ntTSL 4 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 C8orf59P2-201ENST00000603441 271 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC4.53□□□□□ -1.68
ZNF428Q96B54 AL355877.2-201ENST00000603670 358 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC113139.1-201ENST00000605049 239 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC110741.2-201ENST00000605278 268 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC123912.5-201ENST00000605470 343 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 AC005046.1-201ENST00000608515 625 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 HOXA11-AS1_4.1-201ENST00000620901 233 ntBASIC4.53□□□□□ -1.68
ZNF428Q96B54 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF428Q96B54 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF428Q96B54 MBNL1-211ENST00000463374 5092 ntAPPRIS P4 TSL 1 (best) BASIC4.53□□□□□ -1.68
ZNF428Q96B54 MTND5P1-201ENST00000445440 1375 ntBASIC4.53□□□□□ -1.69
ZNF428Q96B54 AL079305.1-201ENST00000623159 3008 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 SNORD62.1-201ENST00000362541 86 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 RNU6-105P-201ENST00000363909 104 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 Y_RNA.339-201ENST00000365325 102 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 Y_RNA.482-201ENST00000384377 111 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 Z98941.1-201ENST00000407764 100 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC239803.1-203ENST00000411978 452 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 UBE2Q2P12-201ENST00000414573 204 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 RPS3AP12-201ENST00000443616 753 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC115115.1-201ENST00000449927 248 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 snoU109.2-201ENST00000459316 135 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 RPL23AP49-201ENST00000492925 468 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 RPS27P26-201ENST00000494583 239 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 SEM1P1-201ENST00000506694 209 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC109329.1-201ENST00000518744 317 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 AP005639.2-201ENST00000527592 928 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC090592.1-203ENST00000533942 575 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC127894.1-201ENST00000548266 851 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 ZNF804B-202ENST00000611114 3968 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 USP33-201ENST00000357428 4155 ntTSL 5 BASIC4.52□□□□□ -1.69
ZNF428Q96B54 MTND5P30-201ENST00000452896 1731 ntBASIC4.52□□□□□ -1.69
ZNF428Q96B54 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF428Q96B54 AK9-203ENST00000368948 2478 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF428Q96B54 KIAA1841-202ENST00000356719 2149 ntTSL 5 BASIC4.51□□□□□ -1.69
ZNF428Q96B54 HERC4-201ENST00000277817 4371 ntTSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF428Q96B54 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC4.51□□□□□ -1.69
ZNF428Q96B54 Y_RNA.384-201ENST00000383909 102 ntBASIC4.51□□□□□ -1.69
ZNF428Q96B54 FTH1P15-201ENST00000406984 280 ntBASIC4.51□□□□□ -1.69
Retrieved 100 of 98,524 protein–RNA pairs in 114.5 ms