Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.6□□□□□ -1.83
HPS3Q969F9 FAM157A-202ENST00000615155 405 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 AC104985.2-201ENST00000620598 500 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 Z69720.2-201ENST00000624755 279 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 MIR3199-2-201ENST00000636243 86 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 ADAM3A-203ENST00000461344 2157 ntBASIC3.6□□□□□ -1.83
HPS3Q969F9 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.6□□□□□ -1.83
HPS3Q969F9 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.6□□□□□ -1.83
HPS3Q969F9 AC010680.1-201ENST00000590024 3590 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS3Q969F9 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 AC138393.1-203ENST00000327086 343 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-37P-201ENST00000362692 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-11P-201ENST00000364234 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-7-201ENST00000364784 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-8-201ENST00000365467 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-25P-201ENST00000383873 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 SNORD116-11-201ENST00000383882 92 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-1-201ENST00000383898 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-48P-201ENST00000384161 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-36P-201ENST00000384172 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-4P-201ENST00000384205 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-5P-201ENST00000384238 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-3P-201ENST00000384314 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-16P-201ENST00000384385 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-15P-201ENST00000384534 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-2-201ENST00000384627 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-29P-201ENST00000384637 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-9-201ENST00000384776 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-33P-201ENST00000384793 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 U3.37-201ENST00000408528 213 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.59□□□□□ -1.83
HPS3Q969F9 AC098831.1-201ENST00000440661 216 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AC115115.1-201ENST00000449927 248 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS3Q969F9 AC233279.1-201ENST00000455300 423 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 snoU109.2-201ENST00000459316 135 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS3Q969F9 RPL39P5-202ENST00000512505 151 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AC008549.1-201ENST00000512900 643 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-566P-201ENST00000516790 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 PKIA-203ENST00000518467 588 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.59□□□□□ -1.83
HPS3Q969F9 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.59□□□□□ -1.83
HPS3Q969F9 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.59□□□□□ -1.83
HPS3Q969F9 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC3.59□□□□□ -1.83
HPS3Q969F9 MIR2682-201ENST00000580305 110 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.59□□□□□ -1.83
HPS3Q969F9 AC100830.2-201ENST00000581636 240 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AL451007.1-201ENST00000595491 289 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 RNU6-6P-201ENST00000606623 107 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 AL138726.1-201ENST00000614873 333 ntBASIC3.59□□□□□ -1.83
HPS3Q969F9 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC3.59□□□□□ -1.83
HPS3Q969F9 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 EVI5-201ENST00000370331 7403 ntAPPRIS P3 TSL 1 (best) BASIC3.59□□□□□ -1.83
HPS3Q969F9 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC3.59□□□□□ -1.83
HPS3Q969F9 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.59□□□□□ -1.84
HPS3Q969F9 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.59□□□□□ -1.84
HPS3Q969F9 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HPS3Q969F9 RASA1-202ENST00000456692 3776 ntAPPRIS ALT2 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS3Q969F9 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.58□□□□□ -1.84
HPS3Q969F9 MARCH7-202ENST00000409175 2402 ntAPPRIS P1 TSL 2 BASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-562P-201ENST00000362731 107 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-797P-201ENST00000363101 109 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 RNA5SP267-201ENST00000364893 126 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-898P-201ENST00000365627 104 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-805P-201ENST00000365643 106 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 Z98749.2-208ENST00000381646 500 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 DEFB134-201ENST00000382205 314 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-72P-201ENST00000384285 79 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AL357075.1-201ENST00000404107 726 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS3Q969F9 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.58□□□□□ -1.84
HPS3Q969F9 LINC02264-201ENST00000442020 576 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS3Q969F9 RPL32P28-201ENST00000443577 397 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 HIGD1AP2-201ENST00000446367 280 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS3Q969F9 AMD1P1-201ENST00000457220 922 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC104472.2-201ENST00000469035 601 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS3Q969F9 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 Y_RNA.682-201ENST00000516457 100 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 Y_RNA.687-201ENST00000516558 91 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 RNU6-1088P-201ENST00000516850 104 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 SNORD59.2-201ENST00000516873 68 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC109479.2-201ENST00000517842 174 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC105029.1-201ENST00000520250 669 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AL133279.1-202ENST00000556789 456 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS3Q969F9 AC007151.1-201ENST00000572774 483 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC138761.3-201ENST00000579993 334 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 MIR6134-201ENST00000617606 109 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC091903.1-201ENST00000624322 454 ntBASIC3.58□□□□□ -1.84
HPS3Q969F9 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.58□□□□□ -1.84
HPS3Q969F9 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
HPS3Q969F9 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms