Protein–RNA interactions for Protein: Q8NFR3

SPTSSB, Serine palmitoyltransferase small subunit B, humanhuman

Predictions only

Length 76 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTSSBQ8NFR3 RNA5SP387-201ENST00000364226 106 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 SNORD114-6-201ENST00000364393 72 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 RNA5SP171-201ENST00000391071 115 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 TIMM9P1-201ENST00000436122 256 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC234064.1-201ENST00000436312 247 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 GTF2IP13-201ENST00000438487 386 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 MTCO3P45-201ENST00000443036 613 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 MTATP6P30-201ENST00000443540 664 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC132479.1-201ENST00000449160 144 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 OFD1P7Y-201ENST00000454643 1155 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 GTF2IP12-201ENST00000456547 356 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 SNORD13-201ENST00000459299 104 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC130509.1-201ENST00000464158 433 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AL163195.1-201ENST00000496941 348 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 LINC02472-201ENST00000512268 575 ntTSL 2 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-714P-201ENST00000516963 103 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC084364.2-201ENST00000546924 395 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC084879.2-201ENST00000551656 369 ntTSL 3 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC104229.1-201ENST00000561364 255 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC136618.2-201ENST00000575091 400 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 BNIP3P16-201ENST00000589779 534 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AC008751.2-201ENST00000597885 980 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 AL590095.2-201ENST00000604136 117 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 MIR92B-201ENST00000607575 96 ntBASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.38□□□□□ -2.35
SPTSSBQ8NFR3 DNAJC12-202ENST00000339758 1064 ntTSL 1 (best) BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-1066P-201ENST00000363573 105 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 MIR483-201ENST00000385070 76 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 MIR92A1-201ENST00000385233 78 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 MIR548B-201ENST00000385247 97 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RNU11-5P-201ENST00000391216 129 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RPS15AP12-201ENST00000419498 388 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 SNX2P2-201ENST00000424553 323 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 COX7BP2-201ENST00000437976 242 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC009299.3-202ENST00000445372 538 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 LINC00374-201ENST00000454780 800 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 snoU13.8-201ENST00000458890 104 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RNU1-131P-201ENST00000458943 161 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RPL30P6-201ENST00000475925 342 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 FAM92A1P2-202ENST00000504766 877 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC010457.1-201ENST00000510469 458 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 RNU6-965P-201ENST00000516721 96 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AL356057.1-201ENST00000533798 831 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC025887.1-201ENST00000578349 264 ntTSL 3 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 SOX2-OT-224ENST00000595313 716 ntTSL 5 BASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 FAM71BP1-201ENST00000604431 523 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 uc_338.15-201ENST00000615470 191 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC018926.1-201ENST00000616335 435 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC130454.1-201ENST00000622948 401 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC132825.7-201ENST00000638744 335 ntBASIC0.37□□□□□ -2.35
SPTSSBQ8NFR3 AC233981.2-201ENST00000611524 1614 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 SNORD114-24-201ENST00000365029 72 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 MIR520E-201ENST00000384867 87 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AL117342.1-201ENST00000404861 406 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 LINC01866-201ENST00000421181 201 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 RPS6P15-201ENST00000431996 751 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC003991.1-202ENST00000447058 777 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 LINC01201-202ENST00000451431 401 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 COX6CP6-201ENST00000490840 228 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 RN7SKP258-201ENST00000517151 304 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AP001004.1-201ENST00000582468 324 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC008543.4-201ENST00000585694 442 ntTSL 2 BASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AL353997.4-201ENST00000586196 166 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AF038458.1-201ENST00000588406 262 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC009229.3-201ENST00000608056 282 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC093788.1-201ENST00000609356 927 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC013412.1-201ENST00000610687 192 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 MIR1264-201ENST00000616374 69 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 AC253576.2-201ENST00000618815 580 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 MIR1248-201ENST00000629190 106 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 ATP8A2P2-201ENST00000437678 1568 ntBASIC0.36□□□□□ -2.35
SPTSSBQ8NFR3 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 SNRPEP3-201ENST00000338402 276 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 RPS26P5-201ENST00000418544 335 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 AC010099.3-201ENST00000423896 409 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 TRIM60P13-201ENST00000432350 1283 ntBASIC0.35□□□□□ -2.35
SPTSSBQ8NFR3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC0.35□□□□□ -2.35
Retrieved 100 of 98,524 protein–RNA pairs in 142.1 ms