Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 RNA5SP217-201ENST00000515959 91 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC134698.4-201ENST00000523451 826 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AL121821.2-201ENST00000556081 394 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 RBM11P1-201ENST00000604951 799 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC007014.2-201ENST00000615581 479 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.21□□□□□ -1.9
HERC6Q8IVU3 UCA1.1-201ENST00000620952 75 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 AC010338.1-201ENST00000621823 717 ntBASIC3.21□□□□□ -1.9
HERC6Q8IVU3 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC096644.4-201ENST00000563417 2912 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC004520.1-201ENST00000608362 1413 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 PRKACB-207ENST00000394838 4294 ntTSL 5 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 CD3D-202ENST00000392884 476 ntTSL 2 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 RNU2-49P-201ENST00000410666 184 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 RNU6-607P-201ENST00000411283 108 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC023141.4-201ENST00000412031 328 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 SNRPEP10-201ENST00000420249 274 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AL669831.1-202ENST00000428504 417 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 MRPS10P2-201ENST00000431226 381 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 GTF2IP20-201ENST00000431663 360 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AL139415.2-201ENST00000431968 163 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 GTF2IP13-201ENST00000438487 386 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AL161651.1-201ENST00000440882 223 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 CALM1P1-201ENST00000442082 433 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 APOA2-205ENST00000468465 421 ntTSL 2 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 RPL38P4-201ENST00000502376 214 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 MTND3P25-201ENST00000509243 135 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 LINC02103-201ENST00000512849 523 ntTSL 5 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC103853.2-201ENST00000519805 716 ntTSL 3 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC107016.2-201ENST00000547968 190 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC006199.1-201ENST00000548728 219 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 LINC02253-201ENST00000559321 448 ntTSL 2 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 AL031601.2-202ENST00000622650 282 ntBASIC3.2□□□□□ -1.9
HERC6Q8IVU3 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
HERC6Q8IVU3 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC093536.2-201ENST00000565257 1406 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 DNAH12-208ENST00000495027 12146 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 TRDN-201ENST00000334268 4770 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC010889.1-201ENST00000566193 2666 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RNU6-82P-201ENST00000363970 107 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 SNORD14B-201ENST00000364533 90 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 SNORA75B-201ENST00000384053 137 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 MIR196B-201ENST00000384852 84 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RPL21P3-201ENST00000395517 478 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RPS4XP7-201ENST00000406274 780 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 U3.37-201ENST00000408528 213 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC233279.1-201ENST00000455300 423 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 SNORD109B-201ENST00000458961 67 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 SNORD109A-201ENST00000459128 67 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RNU7-167P-201ENST00000459160 62 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC146507.2-201ENST00000460608 476 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 YWHAEP4-201ENST00000505390 198 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC097375.2-201ENST00000510416 579 ntTSL 5 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RNU2-69P-201ENST00000516061 100 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC069113.1-201ENST00000517763 267 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 AC073539.2-201ENST00000597113 165 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 RMST_4.1-201ENST00000616886 107 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 SCARNA4-202ENST00000625402 129 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.19□□□□□ -1.9
HERC6Q8IVU3 ZNF519P1-201ENST00000449011 1626 ntBASIC3.19□□□□□ -1.9
HERC6Q8IVU3 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 U3.6-201ENST00000363622 211 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNY3P3-201ENST00000363816 102 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNU6-1090P-201ENST00000364065 94 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 Y_RNA.256-201ENST00000364594 104 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNU6-898P-201ENST00000365627 104 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNU6-19P-201ENST00000384718 107 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNU6-908P-201ENST00000410160 94 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RNU6-373P-201ENST00000411247 98 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 ATG3P1-201ENST00000419507 911 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AL121601.2-201ENST00000438019 707 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC012308.1-201ENST00000451232 178 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 MTCO3P38-201ENST00000468910 766 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 RPL21P99-201ENST00000480369 423 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC011005.2-201ENST00000487324 359 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC079600.2-201ENST00000550076 130 ntBASIC3.18□□□□□ -1.9
HERC6Q8IVU3 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.18□□□□□ -1.9
HERC6Q8IVU3 LRRC37A5P-203ENST00000580181 585 ntBASIC3.18□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 108 ms