Protein–RNA interactions for Protein: Q6ZT12

UBR3, E3 ubiquitin-protein ligase UBR3, humanhuman

Predictions only

Length 1,888 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3Q6ZT12 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.32□□□□□ -2.36
UBR3Q6ZT12 CYB5AP5-201ENST00000549779 389 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
UBR3Q6ZT12 AC120349.1-201ENST00000599498 282 ntTSL 5 BASIC0.32□□□□□ -2.36
UBR3Q6ZT12 ELOCP5-201ENST00000604924 333 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 MTND5P31-201ENST00000419366 1374 ntBASIC0.32□□□□□ -2.36
UBR3Q6ZT12 RNU1-58P-201ENST00000362413 163 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 RNA5SP327-201ENST00000362494 101 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 MIR1267-201ENST00000408723 78 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AL354733.1-204ENST00000412069 424 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 USP9YP19-201ENST00000412165 485 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 USP9YP13-201ENST00000417797 480 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 Z99497.1-201ENST00000421282 135 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AL357315.1-201ENST00000422930 254 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 snoU13.9-201ENST00000458927 103 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC006199.1-201ENST00000548728 219 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 MIR5589-201ENST00000579442 60 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC073569.3-201ENST00000619055 682 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC073052.2-202ENST00000622296 775 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC099654.5-201ENST00000636479 350 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 SNORD18A-201ENST00000363753 72 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 MIR329-2-201ENST00000385029 84 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 RNA5SP100-201ENST00000410903 110 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 RNA5SP59-201ENST00000410922 110 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 TRBVA-201ENST00000498804 316 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC107463.1-203ENST00000509713 284 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 5S_rRNA.3-201ENST00000517021 110 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 C1DP5-201ENST00000525775 383 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 5S_rRNA.19-201ENST00000612131 110 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 5S_rRNA.18-201ENST00000621941 110 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC018692.1-202ENST00000623559 676 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 AC009033.1-201ENST00000624279 431 ntBASIC0.31□□□□□ -2.36
UBR3Q6ZT12 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.31□□□□□ -2.36
UBR3Q6ZT12 ANKRD26P2-201ENST00000445530 1710 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AC134026.1-201ENST00000623249 2239 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 MRPS36P1-201ENST00000421291 307 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AL512844.2-201ENST00000433990 593 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 HSPE1P13-201ENST00000451143 297 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 TRBVB-201ENST00000477100 408 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AL132857.1-201ENST00000555180 708 ntBASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AC092071.1-201ENST00000597260 549 ntTSL 5 BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.3□□□□□ -2.36
UBR3Q6ZT12 AL355615.1-201ENST00000406187 641 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RNU2-47P-201ENST00000410649 186 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC020559.1-201ENST00000444229 583 ntTSL 2 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 COX6CP6-201ENST00000490840 228 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RNU4-77P-201ENST00000516692 156 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 CR383656.7-201ENST00000548164 174 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC011611.2-201ENST00000549888 358 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 MIR3937-201ENST00000580135 106 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC069061.2-202ENST00000580280 357 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 MZT1P2-201ENST00000604387 248 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC013470.4-201ENST00000619978 986 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 MTND4P16-201ENST00000466108 1367 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC138393.1-203ENST00000327086 343 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RPS27-201ENST00000368567 350 ntAPPRIS P1 TSL 1 (best) BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 SNORA2A-201ENST00000383885 135 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 MIR19B1-201ENST00000384829 87 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RPS3AP37-201ENST00000419176 745 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AL606489.2-201ENST00000433886 234 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RPL26P6-201ENST00000440913 438 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AL034345.2-203ENST00000453417 383 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AP1S2P1-201ENST00000457344 379 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RNA5SP285-201ENST00000516619 119 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 HSPA8P13-201ENST00000523715 472 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 LINC02235-201ENST00000534675 466 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 APOOP3-201ENST00000536787 586 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC009268.1-201ENST00000561352 1203 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC023158.1-201ENST00000561632 1025 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 ADAM3B-201ENST00000569937 840 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC090079.2-201ENST00000575289 768 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC021851.1-201ENST00000608537 1082 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AC002550.2-201ENST00000621246 394 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 AL109659.3-201ENST00000624985 950 ntBASIC0.29□□□□□ -2.36
UBR3Q6ZT12 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC0.29□□□□□ -2.36
UBR3Q6ZT12 RNU6-167P-201ENST00000384292 106 ntBASIC0.28□□□□□ -2.36
UBR3Q6ZT12 AC078974.1-201ENST00000411597 223 ntBASIC0.28□□□□□ -2.36
UBR3Q6ZT12 BEND7P1-201ENST00000422058 457 ntBASIC0.28□□□□□ -2.36
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms