Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 DMD-203ENST00000357033 13956 ntAPPRIS P3 TSL 1 (best) BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.399-201ENST00000383955 105 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RNU6-434P-201ENST00000384376 107 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AL031121.1-201ENST00000406553 254 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RNA5SP293-201ENST00000410527 113 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC245291.1-201ENST00000419501 328 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC098614.2-201ENST00000426040 255 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 HMGB1P9-201ENST00000429856 646 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 Z75741.1-201ENST00000446793 314 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RN7SL807P-201ENST00000470923 297 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC096733.1-201ENST00000503844 402 ntTSL 3 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 HIGD1AP13-201ENST00000509878 289 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RNU2-69P-201ENST00000516061 100 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RNU6-864P-201ENST00000516256 108 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 RNU6-277P-201ENST00000516272 106 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.691-201ENST00000516611 103 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC090136.1-201ENST00000520009 240 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC103726.1-201ENST00000520785 474 ntTSL 2 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 MIR3942-201ENST00000585264 109 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC011471.1-201ENST00000585766 187 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AL022345.1-201ENST00000607292 135 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AL121757.2-201ENST00000611223 313 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 U2.17-201ENST00000611454 95 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC104237.2-201ENST00000612456 443 ntBASIC3.69□□□□□ -1.82
LONRF3Q496Y0 PMS1-215ENST00000447232 2576 ntTSL 2 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.69□□□□□ -1.82
LONRF3Q496Y0 AC006026.1-201ENST00000444025 1803 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RNU6-1252P-201ENST00000363054 104 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 Y_RNA.301-201ENST00000364990 103 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RNU6-805P-201ENST00000365643 106 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 EIF4E2P1-201ENST00000393781 255 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 FO393413.1-201ENST00000402892 195 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 NCOR1P3-201ENST00000420479 303 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC007560.1-201ENST00000426912 237 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 NDUFA5P4-201ENST00000436704 385 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RPL23AP22-201ENST00000437556 453 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RNU7-167P-201ENST00000459160 62 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RPL31P41-201ENST00000477967 372 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 RNU6-1315P-201ENST00000517187 99 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AP000873.2-206ENST00000529811 429 ntTSL 2 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 EBAG9-207ENST00000531677 777 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC008115.2-201ENST00000539988 241 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AC090115.3-201ENST00000553218 849 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 MTCO3P23-201ENST00000561363 289 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AL137843.1-201ENST00000605078 385 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 ATP1B3P1-201ENST00000605365 821 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 MIR1302-1-201ENST00000637932 143 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
LONRF3Q496Y0 AL365361.1-201ENST00000566942 3481 ntBASIC3.68□□□□□ -1.82
LONRF3Q496Y0 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 GRAMD1C-202ENST00000440446 3475 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC093908.1-201ENST00000623125 8092 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNA5SP383-201ENST00000362934 120 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNA5SP374-201ENST00000362939 125 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNU6-778P-201ENST00000363269 103 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 SNORD113-7-201ENST00000363762 77 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNU6-1180P-201ENST00000364935 107 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 SNORA4.3-201ENST00000365564 137 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 DYNLT3P1-201ENST00000378574 347 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 DEFB125-201ENST00000382410 587 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNU6-1025P-201ENST00000410629 104 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 MTND1P14-201ENST00000427400 950 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC125238.1-201ENST00000448842 249 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RPL21P41-201ENST00000459863 264 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 OARD1-209ENST00000471367 401 ntTSL 2 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC113155.1-201ENST00000511141 769 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 TBCAP3-201ENST00000512475 312 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 MRPS36P2-201ENST00000512569 299 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC104136.1-201ENST00000512969 394 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 IL7-206ENST00000520269 456 ntTSL 3 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AL355375.2-201ENST00000574825 175 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 MIR5680-201ENST00000577577 84 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 MIR8057-201ENST00000620957 69 ntBASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.67□□□□□ -1.82
LONRF3Q496Y0 AC110491.1-201ENST00000562191 2010 ntBASIC3.66□□□□□ -1.82
LONRF3Q496Y0 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 AGR3-201ENST00000310398 749 ntAPPRIS P1 TSL 1 (best) BASIC3.66□□□□□ -1.82
LONRF3Q496Y0 RNU4-79P-201ENST00000362764 141 ntBASIC3.66□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 288.2 ms