Protein–RNA interactions for Protein: Q06643

LTB, Lymphotoxin-beta, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBQ06643 RPL21P41-201ENST00000459863 264 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RPS27P29-201ENST00000463110 252 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.01□□□□□ -1.93
LTBQ06643 HSPE1P6-201ENST00000479457 291 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC093663.1-201ENST00000497190 394 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC097462.2-201ENST00000504623 481 ntBASIC3.01□□□□□ -1.93
LTBQ06643 FCF1P8-201ENST00000510322 597 ntBASIC3.01□□□□□ -1.93
LTBQ06643 PHBP14-201ENST00000512887 367 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RNA5SP341-201ENST00000516261 117 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RNU6-1046P-201ENST00000516538 107 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC136777.1-201ENST00000517765 369 ntTSL 4 BASIC3.01□□□□□ -1.93
LTBQ06643 AC104027.1-201ENST00000521887 300 ntBASIC3.01□□□□□ -1.93
LTBQ06643 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.01□□□□□ -1.93
LTBQ06643 AL157688.1-201ENST00000555990 369 ntTSL 3 BASIC3.01□□□□□ -1.93
LTBQ06643 MIR3186-201ENST00000577404 85 ntBASIC3.01□□□□□ -1.93
LTBQ06643 FAM60BP-201ENST00000578364 658 ntBASIC3.01□□□□□ -1.93
LTBQ06643 MIR3945-201ENST00000581853 98 ntBASIC3.01□□□□□ -1.93
LTBQ06643 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC3.01□□□□□ -1.93
LTBQ06643 BDH2P1-201ENST00000602288 736 ntBASIC3.01□□□□□ -1.93
LTBQ06643 RPL12P50-201ENST00000603116 116 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AC006557.5-201ENST00000603126 811 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AP000942.4-201ENST00000604811 241 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC3.01□□□□□ -1.93
LTBQ06643 AC010378.1-201ENST00000619270 362 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AL360181.4-201ENST00000621752 134 ntBASIC3.01□□□□□ -1.93
LTBQ06643 AL591030.1-201ENST00000626131 627 ntTSL 3 BASIC3.01□□□□□ -1.93
LTBQ06643 HS1BP3-208ENST00000631166 78 ntTSL 5 BASIC3.01□□□□□ -1.93
LTBQ06643 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LTBQ06643 SCOC-203ENST00000394203 1999 ntTSL 2 BASIC3.01□□□□□ -1.93
LTBQ06643 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.01□□□□□ -1.93
LTBQ06643 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.01□□□□□ -1.93
LTBQ06643 MT-ND5-201ENST00000361567 1812 ntAPPRIS P1 BASIC3□□□□□ -1.93
LTBQ06643 MTND5P10-201ENST00000603719 1809 ntBASIC3□□□□□ -1.93
LTBQ06643 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3□□□□□ -1.93
LTBQ06643 KPNA2P1-201ENST00000458289 1591 ntBASIC3□□□□□ -1.93
LTBQ06643 Y_RNA.5-201ENST00000362334 102 ntBASIC3□□□□□ -1.93
LTBQ06643 Y_RNA.145-201ENST00000363527 102 ntBASIC3□□□□□ -1.93
LTBQ06643 Y_RNA.534-201ENST00000384599 112 ntBASIC3□□□□□ -1.93
LTBQ06643 RNU6-95P-201ENST00000384697 107 ntBASIC3□□□□□ -1.93
LTBQ06643 MIR578-201ENST00000384828 96 ntBASIC3□□□□□ -1.93
LTBQ06643 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC3□□□□□ -1.93
LTBQ06643 AC080125.1-201ENST00000414888 684 ntBASIC3□□□□□ -1.93
LTBQ06643 RPL21P90-201ENST00000415692 466 ntBASIC3□□□□□ -1.93
LTBQ06643 AC113618.1-201ENST00000416747 285 ntBASIC3□□□□□ -1.93
LTBQ06643 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC3□□□□□ -1.93
LTBQ06643 HIGD1AP11-201ENST00000438361 280 ntBASIC3□□□□□ -1.93
LTBQ06643 AC025750.2-201ENST00000442609 450 ntBASIC3□□□□□ -1.93
LTBQ06643 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3□□□□□ -1.93
LTBQ06643 RNU7-170P-201ENST00000459303 61 ntBASIC3□□□□□ -1.93
LTBQ06643 RPL27AP5-201ENST00000469428 449 ntBASIC3□□□□□ -1.93
LTBQ06643 VN1R104P-201ENST00000505115 1009 ntBASIC3□□□□□ -1.93
LTBQ06643 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC3□□□□□ -1.93
LTBQ06643 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3□□□□□ -1.93
LTBQ06643 AC026782.1-201ENST00000512952 449 ntBASIC3□□□□□ -1.93
LTBQ06643 RNU6-1137P-201ENST00000517073 99 ntBASIC3□□□□□ -1.93
LTBQ06643 CYCSP27-201ENST00000527643 293 ntBASIC3□□□□□ -1.93
LTBQ06643 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3□□□□□ -1.93
LTBQ06643 AL355836.1-201ENST00000555951 870 ntBASIC3□□□□□ -1.93
LTBQ06643 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3□□□□□ -1.93
LTBQ06643 MIR5680-201ENST00000577577 84 ntBASIC3□□□□□ -1.93
LTBQ06643 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LTBQ06643 MIR4672-201ENST00000583126 81 ntBASIC3□□□□□ -1.93
LTBQ06643 SNORD84-203ENST00000584275 78 ntBASIC3□□□□□ -1.93
LTBQ06643 AP000654.2-201ENST00000605633 586 ntBASIC3□□□□□ -1.93
LTBQ06643 AL157817.1-201ENST00000614264 790 ntBASIC3□□□□□ -1.93
LTBQ06643 SMAD5-AS1_2.1-201ENST00000617906 131 ntBASIC3□□□□□ -1.93
LTBQ06643 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3□□□□□ -1.93
LTBQ06643 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3□□□□□ -1.93
LTBQ06643 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3□□□□□ -1.93
LTBQ06643 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3□□□□□ -1.93
LTBQ06643 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC3□□□□□ -1.93
LTBQ06643 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC3□□□□□ -1.93
LTBQ06643 AL672296.1-201ENST00000427780 2158 ntBASIC3□□□□□ -1.93
LTBQ06643 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.99□□□□□ -1.93
LTBQ06643 MTND4P1-201ENST00000457501 1466 ntBASIC2.99□□□□□ -1.93
LTBQ06643 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC2.99□□□□□ -1.93
LTBQ06643 MIR449A-201ENST00000362113 91 ntBASIC2.99□□□□□ -1.93
LTBQ06643 Y_RNA.112-201ENST00000363250 102 ntBASIC2.99□□□□□ -1.93
LTBQ06643 SNORD56.3-201ENST00000363507 71 ntBASIC2.99□□□□□ -1.93
LTBQ06643 RNU6-128P-201ENST00000383976 107 ntBASIC2.99□□□□□ -1.93
LTBQ06643 Y_RNA.404-201ENST00000383978 102 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AP000567.1-201ENST00000406413 156 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC2.99□□□□□ -1.93
LTBQ06643 RPL23AP22-201ENST00000437556 453 ntBASIC2.99□□□□□ -1.93
LTBQ06643 MTND3P2-201ENST00000438452 342 ntBASIC2.99□□□□□ -1.93
LTBQ06643 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.99□□□□□ -1.93
LTBQ06643 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.99□□□□□ -1.93
LTBQ06643 AL360271.2-201ENST00000447710 161 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC2.99□□□□□ -1.93
LTBQ06643 AL049874.1-201ENST00000489560 388 ntBASIC2.99□□□□□ -1.93
LTBQ06643 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC2.99□□□□□ -1.93
LTBQ06643 SUMO2P6-201ENST00000505273 288 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC097473.1-201ENST00000508142 408 ntBASIC2.99□□□□□ -1.93
LTBQ06643 MTND3P25-201ENST00000509243 135 ntBASIC2.99□□□□□ -1.93
LTBQ06643 AC116337.1-201ENST00000509680 687 ntBASIC2.99□□□□□ -1.93
LTBQ06643 RNU6-1016P-201ENST00000516689 94 ntBASIC2.99□□□□□ -1.93
LTBQ06643 RNA5SP468-201ENST00000516782 93 ntBASIC2.99□□□□□ -1.93
LTBQ06643 RNA5SP471-201ENST00000516971 106 ntBASIC2.99□□□□□ -1.93
LTBQ06643 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.99□□□□□ -1.93
LTBQ06643 AC013799.1-201ENST00000531157 348 ntTSL 2 BASIC2.99□□□□□ -1.93
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms