Protein–RNA interactions for Protein: P78363

ABCA4, Retinal-specific ATP-binding cassette transporter, humanhuman

Predictions only

Length 2,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4P78363 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC0.7□□□□□ -2.3
ABCA4P78363 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC0.7□□□□□ -2.3
ABCA4P78363 hsa-mir-3130-1.1-201ENST00000579223 75 ntBASIC0.7□□□□□ -2.3
ABCA4P78363 Y_RNA.67-201ENST00000362870 100 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 VTRNA1-3-201ENST00000365645 89 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 FO680682.1-201ENST00000421261 345 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA4P78363 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA4P78363 AC108729.1-201ENST00000487812 947 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AL160314.1-201ENST00000490836 438 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC098862.1-201ENST00000504991 413 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC005832.3-201ENST00000537929 631 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AL160236.1-201ENST00000556317 195 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC010900.2-201ENST00000604508 210 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 PRR13P7-201ENST00000605538 430 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC006270.3-201ENST00000605967 1036 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC0.69□□□□□ -2.3
ABCA4P78363 AC138627.2-201ENST00000624202 601 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC090517.3-201ENST00000625170 141 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC092125.1-201ENST00000562568 1995 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 MTND5P9-201ENST00000503854 1755 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 RNU6-288P-201ENST00000363690 104 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 Y_RNA.245-201ENST00000364493 95 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 RNU6-657P-201ENST00000383904 107 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 MIR1267-201ENST00000408723 78 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 C1DP1-201ENST00000426049 402 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AL360175.1-201ENST00000426547 285 ntTSL 5 BASIC0.69□□□□□ -2.3
ABCA4P78363 RNU6-528P-201ENST00000516926 100 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 NRON-201ENST00000517270 370 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC023050.2-201ENST00000544968 387 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC005786.1-201ENST00000588553 154 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 MIR8087-201ENST00000612745 78 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 AC013476.2-201ENST00000614456 459 ntBASIC0.69□□□□□ -2.3
ABCA4P78363 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC0.69□□□□□ -2.3
ABCA4P78363 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ABCA4P78363 SNORD114-2-201ENST00000363953 78 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 RNU6-1005P-201ENST00000384519 107 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC138623.1-201ENST00000418060 216 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 GPM6BP2-201ENST00000432046 144 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 GPM6BP1-201ENST00000446387 144 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC139453.3-201ENST00000493276 369 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC010420.1-201ENST00000515077 509 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC087439.1-201ENST00000517920 398 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC0.68□□□□□ -2.3
ABCA4P78363 APOOP3-201ENST00000536787 586 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC005668.1-201ENST00000571142 476 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 MIR3167-201ENST00000579623 85 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC021646.1-201ENST00000605469 484 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC009974.1-201ENST00000608881 455 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC080188.3-201ENST00000624842 748 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AL391516.1-201ENST00000554380 2449 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ABCA4P78363 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC0.68□□□□□ -2.3
ABCA4P78363 SNORD115-3-201ENST00000363100 82 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 SNORD51.1-201ENST00000365405 77 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 SNORA25B-201ENST00000365507 128 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 MIR16-1-201ENST00000385271 89 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 RPS27P16-201ENST00000425758 201 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 ELOCP14-201ENST00000428070 331 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC0.68□□□□□ -2.3
ABCA4P78363 ELOCP7-201ENST00000439968 331 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC0.68□□□□□ -2.3
ABCA4P78363 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC091860.1-201ENST00000505723 432 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC067942.3-201ENST00000512025 362 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC114550.2-201ENST00000524008 397 ntTSL 3 BASIC0.68□□□□□ -2.3
ABCA4P78363 AL355598.1-201ENST00000604169 202 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC011451.2-201ENST00000604303 598 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AL158032.1-201ENST00000605401 106 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC009229.3-201ENST00000608056 282 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC243829.6-201ENST00000612652 106 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 CENPF-206ENST00000614578 528 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA4P78363 AL359314.1-201ENST00000616913 261 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 AC009032.1-201ENST00000617574 431 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 U1.36-201ENST00000620684 176 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 ZRANB2-AS2-222ENST00000625045 1014 ntTSL 5 BASIC0.68□□□□□ -2.3
ABCA4P78363 AC092192.1-201ENST00000633154 1018 ntBASIC0.68□□□□□ -2.3
ABCA4P78363 FSIP2-206ENST00000611759 3882 ntAPPRIS ALT2 TSL 5 BASIC0.68□□□□□ -2.3
ABCA4P78363 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC0.68□□□□□ -2.3
ABCA4P78363 SNORD14D-201ENST00000384390 87 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AL591034.2-201ENST00000402839 359 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 BTF3P8-201ENST00000414577 526 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 MTATP6P27-201ENST00000416987 621 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 USP9YP26-201ENST00000421008 661 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 MTND2P9-201ENST00000422293 931 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AF212831.1-201ENST00000430064 377 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA4P78363 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC0.67□□□□□ -2.3
ABCA4P78363 AC026410.2-201ENST00000460281 156 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA4P78363 AL118556.1-201ENST00000555257 502 ntTSL 2 BASIC0.67□□□□□ -2.3
ABCA4P78363 AC012414.2-201ENST00000559474 187 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC0.67□□□□□ -2.3
ABCA4P78363 AC091057.3-201ENST00000602684 733 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AL109620.1-201ENST00000618738 1197 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AL121890.5-201ENST00000620848 304 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 AC017037.3-201ENST00000625016 472 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 MIR6759-201ENST00000638110 65 ntBASIC0.67□□□□□ -2.3
ABCA4P78363 CEP57L1-213ENST00000520883 2055 ntTSL 5 BASIC0.67□□□□□ -2.3
Retrieved 100 of 98,524 protein–RNA pairs in 113.9 ms