Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 RNA5SP445-201ENST00000515889 115 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 RNU6-965P-201ENST00000516721 96 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 RNU6-143P-201ENST00000516942 93 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 SNORA31.17-201ENST00000516953 127 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC109329.1-201ENST00000518744 317 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC090821.2-201ENST00000523552 176 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 RPL21P5-201ENST00000554662 472 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.06□□□□□ -2.24
HIST1H3AP68431 WISP1-OT1-201ENST00000602893 642 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC012360.2-201ENST00000609349 391 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 Metazoa_SRP.32-201ENST00000622685 286 ntBASIC1.06□□□□□ -2.24
HIST1H3AP68431 AC092125.1-201ENST00000562568 1995 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 RNU6-939P-201ENST00000384634 107 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 TOMM22P2-201ENST00000430735 237 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 AL135790.2-201ENST00000437701 267 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 TRAPPC2P8-201ENST00000440676 396 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 TRAPPC2P3-201ENST00000443200 321 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC012308.1-201ENST00000451232 178 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC009474.2-201ENST00000451383 136 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC024589.1-201ENST00000512207 263 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 SNORA31.19-201ENST00000517079 126 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 RNU6-902P-201ENST00000517212 91 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC009902.1-201ENST00000519351 183 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC104417.1-201ENST00000523974 751 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 COPS8P3-201ENST00000526024 482 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC104072.1-201ENST00000568817 668 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC1.05□□□□□ -2.24
HIST1H3AP68431 MIR4298-201ENST00000584380 73 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 VN1R83P-201ENST00000595685 445 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC004987.4-201ENST00000603383 338 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC097468.3-201ENST00000607956 456 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 uc_338.15-201ENST00000615470 191 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 SPTSSB-205ENST00000620149 231 ntAPPRIS P1 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC1.05□□□□□ -2.24
HIST1H3AP68431 AC112204.3-201ENST00000623822 332 ntBASIC1.05□□□□□ -2.24
HIST1H3AP68431 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC1.05□□□□□ -2.24
HIST1H3AP68431 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.04□□□□□ -2.24
HIST1H3AP68431 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HIST1H3AP68431 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HIST1H3AP68431 RNU6-289P-201ENST00000364093 107 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 RNU6-482P-201ENST00000391068 107 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 MTCO1P56-201ENST00000401674 224 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 BTF3P4-201ENST00000418852 495 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AL353718.1-201ENST00000451028 517 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 AC106821.1-201ENST00000502861 572 ntTSL 5 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 RPF2P2-201ENST00000504693 896 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 SNORA31.3-201ENST00000516029 96 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 AC021451.1-201ENST00000523498 1129 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AP005433.1-201ENST00000582939 620 ntTSL 2 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AC244093.3-201ENST00000615419 411 ntTSL 3 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AL353770.2-201ENST00000620024 78 ntBASIC1.04□□□□□ -2.24
HIST1H3AP68431 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 IL6ST-203ENST00000381287 8667 ntTSL 5 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC1.04□□□□□ -2.24
HIST1H3AP68431 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 AC011604.2-202ENST00000540229 2451 ntAPPRIS P5 TSL 2 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 TDRD15-202ENST00000622654 5805 ntAPPRIS P1 BASIC1.04□□□□□ -2.24
HIST1H3AP68431 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC1.03□□□□□ -2.24
HIST1H3AP68431 RNU6-1010P-201ENST00000362757 107 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 RNU6-23P-201ENST00000363283 107 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 RNA5SP99-201ENST00000364020 114 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 RNU6-853P-201ENST00000364306 107 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 SNORA25.8-201ENST00000364831 128 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 Y_RNA.408-201ENST00000383987 102 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AL603865.2-201ENST00000401679 213 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 RAC1P6-201ENST00000423911 575 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AP000235.1-201ENST00000424017 479 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 AC245517.4-201ENST00000448601 281 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AC079448.1-201ENST00000449377 373 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 RPL36AP21-201ENST00000490372 323 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AC026991.1-201ENST00000520815 463 ntTSL 3 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 MIR4524B-201ENST00000581569 115 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AC022596.1-201ENST00000582895 302 ntTSL 5 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 AP000942.3-201ENST00000603702 160 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 AL121890.5-201ENST00000620848 304 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 AP000676.3-201ENST00000623299 569 ntBASIC1.03□□□□□ -2.24
HIST1H3AP68431 LINC01359-207ENST00000634799 487 ntTSL 5 BASIC1.03□□□□□ -2.24
HIST1H3AP68431 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC1.03□□□□□ -2.24
HIST1H3AP68431 MTND4P25-201ENST00000441039 533 ntBASIC1.02□□□□□ -2.25
HIST1H3AP68431 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC1.02□□□□□ -2.25
HIST1H3AP68431 AL078601.1-201ENST00000444542 271 ntBASIC1.02□□□□□ -2.25
HIST1H3AP68431 AL096829.2-201ENST00000446582 742 ntBASIC1.02□□□□□ -2.25
HIST1H3AP68431 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.02□□□□□ -2.25
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms