Protein–RNA interactions for Protein: P53667

LIMK1, LIM domain kinase 1, humanhuman

Predictions only

Length 647 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1P53667 AC092001.1-201ENST00000453012 261 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AL441985.1-201ENST00000457727 251 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 RPL23AP11-201ENST00000475260 469 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC2.72□□□□□ -1.97
LIMK1P53667 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMK1P53667 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMK1P53667 RNU6-405P-201ENST00000516637 110 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC2.72□□□□□ -1.97
LIMK1P53667 MIR4775-201ENST00000581168 75 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AL589765.7-201ENST00000601684 629 ntTSL 3 BASIC2.72□□□□□ -1.97
LIMK1P53667 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC2.72□□□□□ -1.97
LIMK1P53667 AC025449.1-201ENST00000603896 529 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC004520.1-201ENST00000608362 1413 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC104073.3-201ENST00000610942 955 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 AC011155.2-201ENST00000623202 216 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 ZNF72P-201ENST00000425869 1908 ntBASIC2.72□□□□□ -1.97
LIMK1P53667 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LIMK1P53667 CLLU1-201ENST00000378485 3897 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.97
LIMK1P53667 NETO1-202ENST00000397929 1849 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LIMK1P53667 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.71□□□□□ -1.98
LIMK1P53667 MIR412-201ENST00000362142 91 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNU6-1120P-201ENST00000362988 108 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNU4-40P-201ENST00000364351 143 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 Y_RNA.436-201ENST00000384097 102 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNU6-1029P-201ENST00000384109 107 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 SNORA40C-201ENST00000391285 128 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RPS4XP7-201ENST00000406274 780 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNU6ATAC37P-201ENST00000408328 131 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNA5SP425-201ENST00000410336 112 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 RNA5SP274-201ENST00000410484 108 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AC008440.2-201ENST00000413496 423 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMK1P53667 OR51A5P-201ENST00000415429 942 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 LINC00428-201ENST00000415620 227 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMK1P53667 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.71□□□□□ -1.98
LIMK1P53667 AL162395.1-201ENST00000457882 422 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 TPT1P7-201ENST00000458300 517 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.71□□□□□ -1.98
LIMK1P53667 MIR4648-201ENST00000580107 72 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AC023043.3-201ENST00000593113 385 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AL049779.4-201ENST00000604500 156 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AL022154.1-201ENST00000604698 785 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AC008945.2-201ENST00000606056 604 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 C8orf59-207ENST00000611854 563 ntAPPRIS P1 TSL 2 BASIC2.71□□□□□ -1.98
LIMK1P53667 Z99129.1-201ENST00000612510 255 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 AC093783.1-201ENST00000612976 329 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMK1P53667 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.71□□□□□ -1.98
LIMK1P53667 AC080128.1-201ENST00000474389 1917 ntBASIC2.71□□□□□ -1.98
LIMK1P53667 CYLC2-201ENST00000374798 2171 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
LIMK1P53667 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
LIMK1P53667 ATP11C-201ENST00000327569 6115 ntAPPRIS P3 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIMK1P53667 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LIMK1P53667 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIMK1P53667 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
LIMK1P53667 Y_RNA.194-201ENST00000363985 102 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 Y_RNA.238-201ENST00000364441 102 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 RNA5SP247-201ENST00000411181 105 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.7□□□□□ -1.98
LIMK1P53667 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.7□□□□□ -1.98
LIMK1P53667 USP9YP14-201ENST00000430663 563 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.7□□□□□ -1.98
LIMK1P53667 RPS15AP9-201ENST00000439856 381 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.7□□□□□ -1.98
LIMK1P53667 AL139109.1-201ENST00000455491 297 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AC133134.1-201ENST00000466800 359 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AC022493.1-201ENST00000492984 337 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 FAM92A1P2-202ENST00000504766 877 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMK1P53667 AC023141.11-201ENST00000508864 202 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMK1P53667 AC112206.3-201ENST00000514578 389 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 SNORD27.1-201ENST00000516319 72 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 SNORA31.15-201ENST00000516771 132 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 RNU6-685P-201ENST00000517088 95 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 FAM92A1P1-201ENST00000528023 890 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 OR5V1-216ENST00000543825 1048 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
LIMK1P53667 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMK1P53667 AC022809.1-201ENST00000579247 428 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMK1P53667 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.7□□□□□ -1.98
LIMK1P53667 AC136475.10-201ENST00000620253 385 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.7□□□□□ -1.98
LIMK1P53667 MIR7157-201ENST00000635801 60 ntBASIC2.7□□□□□ -1.98
LIMK1P53667 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.69□□□□□ -1.98
LIMK1P53667 RNU1-52P-201ENST00000384190 164 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 RNU6-166P-201ENST00000384371 107 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 Y_RNA.623-201ENST00000411128 95 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 PTGES3P4-201ENST00000426243 356 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMK1P53667 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMK1P53667 AL591806.2-201ENST00000433122 173 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC012308.1-201ENST00000451232 178 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 snoU109.2-201ENST00000459316 135 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMK1P53667 MRPL42P6-201ENST00000486397 371 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC116655.1-201ENST00000508324 901 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.69□□□□□ -1.98
LIMK1P53667 RNU6-1178P-201ENST00000516674 107 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 SNORD19.2-201ENST00000516978 73 ntBASIC2.69□□□□□ -1.98
LIMK1P53667 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.69□□□□□ -1.98
LIMK1P53667 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.69□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 120.1 ms