Protein–RNA interactions for Protein: P29074

PTPN4, Tyrosine-protein phosphatase non-receptor type 4, humanhuman

Predictions only

Length 926 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4P29074 AC023194.1-201ENST00000493084 308 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC2.36□□□□□ -2.03
PTPN4P29074 ANXA2P1-201ENST00000505539 926 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC105313.1-201ENST00000509121 353 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 LINC02501-201ENST00000510420 426 ntTSL 2 BASIC2.36□□□□□ -2.03
PTPN4P29074 RNU6ATAC9P-201ENST00000516210 116 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 SNORA31.6-201ENST00000516241 130 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 Y_RNA.689-201ENST00000516589 107 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC2.36□□□□□ -2.03
PTPN4P29074 AC009902.1-201ENST00000519351 183 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC025755.1-201ENST00000521306 278 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AP003072.2-201ENST00000527756 676 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 MYL12BP1-201ENST00000569826 507 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
PTPN4P29074 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2.36□□□□□ -2.03
PTPN4P29074 AC245014.2-201ENST00000603689 287 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC246785.4-201ENST00000605374 287 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC080013.6-201ENST00000606185 215 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 MIR98-201ENST00000606724 119 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 MIR15A-201ENST00000607334 83 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 RNU6-91P-201ENST00000607774 107 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC130324.3-201ENST00000614165 542 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC048344.4-201ENST00000619744 527 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AC099842.1-201ENST00000619919 596 ntBASIC2.36□□□□□ -2.03
PTPN4P29074 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
PTPN4P29074 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC2.36□□□□□ -2.03
PTPN4P29074 CKAP2P1-201ENST00000555477 2049 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 ZNF658B-202ENST00000615961 3375 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 DEFB114-201ENST00000322066 253 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN4P29074 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN4P29074 MIR412-201ENST00000362142 91 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 RNA5SP289-201ENST00000362332 137 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 U8.2-201ENST00000363156 134 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 RNU6-1280P-201ENST00000365211 107 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 Y_RNA.359-201ENST00000365498 102 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 RNU6-641P-201ENST00000384006 107 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 DEFB108C-201ENST00000400154 252 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 SNORA3.2-201ENST00000408221 125 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 RNU4-53P-201ENST00000410828 140 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 MTND1P23-201ENST00000416931 372 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.35□□□□□ -2.03
PTPN4P29074 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN4P29074 AC079781.2-201ENST00000446424 169 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.35□□□□□ -2.03
PTPN4P29074 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN4P29074 AL122001.1-201ENST00000457027 370 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 MTCO2P18-201ENST00000457151 658 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 YWHAEP4-201ENST00000505390 198 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 RNU6-430P-201ENST00000517078 107 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 OR5AQ1P-201ENST00000527596 927 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AP002963.1-201ENST00000530590 184 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AC105245.1-201ENST00000581934 244 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AC008121.1-201ENST00000603244 268 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AC087045.1-201ENST00000605856 382 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AL121992.2-201ENST00000606262 256 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AC245008.1-201ENST00000608123 476 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 AC245884.12-201ENST00000615364 59 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 U6.42-201ENST00000618440 107 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 WWP1-201ENST00000265428 3362 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTPN4P29074 AC103710.2-202ENST00000641454 2853 ntBASIC2.35□□□□□ -2.03
PTPN4P29074 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN4P29074 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTPN4P29074 AC138393.1-203ENST00000327086 343 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
PTPN4P29074 RNU6-282P-201ENST00000365357 103 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AL359511.1-201ENST00000402970 211 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 RN7SKP192-201ENST00000411291 327 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN4P29074 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN4P29074 PIGFP2-201ENST00000421400 651 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.34□□□□□ -2.03
PTPN4P29074 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 NDUFB1P2-201ENST00000449477 176 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 AC006026.2-201ENST00000457376 180 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 RPL23AP45-201ENST00000476406 468 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 RN7SL636P-201ENST00000497504 294 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC108078.2-201ENST00000510750 236 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC097460.1-201ENST00000514624 590 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AP000889.2-201ENST00000532684 490 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.34□□□□□ -2.03
PTPN4P29074 AC009145.3-201ENST00000567386 476 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC2.34□□□□□ -2.03
PTPN4P29074 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN4P29074 MIR3611-201ENST00000584484 83 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.34□□□□□ -2.03
PTPN4P29074 RPS15AP11-201ENST00000594193 385 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC005261.5-201ENST00000596280 355 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC067747.1-201ENST00000608026 250 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC012409.4-201ENST00000612923 249 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC072046.2-201ENST00000618366 268 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AC024940.5-201ENST00000622889 474 ntBASIC2.34□□□□□ -2.03
PTPN4P29074 AL109809.4-201ENST00000603520 2185 ntBASIC2.34□□□□□ -2.04
PTPN4P29074 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 93.5 ms