Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PIGPP4-201ENST00000584447 307 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 AL670379.10-201ENST00000604330 253 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 AL670379.9-201ENST00000605428 253 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 AL021997.1-201ENST00000605757 193 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 RNU6-91P-201ENST00000607774 107 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 AC091834.1-201ENST00000614543 472 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 U4.3-201ENST00000621047 82 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 AC092656.1-203ENST00000624134 423 ntBASIC2.6□□□□□ -1.99
PDGFRAP16234 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC2.6□□□□□ -1.99
PDGFRAP16234 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.6□□□□□ -1.99
PDGFRAP16234 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.6□□□□□ -1.99
PDGFRAP16234 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU6-1287P-201ENST00000362914 107 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU6-116P-201ENST00000384042 109 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU6-72P-201ENST00000384285 79 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU6-1060P-201ENST00000384664 107 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 TRAV41-201ENST00000390468 336 ntAPPRIS P1 BASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU6-550P-201ENST00000391057 101 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AL162578.1-201ENST00000406202 378 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.59□□□□□ -1.99
PDGFRAP16234 LINC01040-201ENST00000425048 666 ntTSL 2 BASIC2.59□□□□□ -1.99
PDGFRAP16234 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.59□□□□□ -1.99
PDGFRAP16234 RPS12P2-201ENST00000439728 269 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AL139109.1-201ENST00000455491 297 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AC080013.2-201ENST00000460866 323 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AC073901.1-201ENST00000462471 408 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RPL23AP45-201ENST00000476406 468 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 MTAPP1-201ENST00000489154 819 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.59□□□□□ -1.99
PDGFRAP16234 RNA5SP112-201ENST00000515937 99 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RPL7P20-201ENST00000520308 745 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 FAM92A1P1-201ENST00000528023 890 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.59□□□□□ -1.99
PDGFRAP16234 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.59□□□□□ -1.99
PDGFRAP16234 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2.59□□□□□ -1.99
PDGFRAP16234 AC007621.1-201ENST00000604544 437 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 AC244517.12-201ENST00000623581 663 ntBASIC2.59□□□□□ -1.99
PDGFRAP16234 RGPD6-201ENST00000329516 7165 ntAPPRIS P1 TSL 1 (best) BASIC2.59□□□□□ -1.99
PDGFRAP16234 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.59□□□□□ -2
PDGFRAP16234 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
PDGFRAP16234 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
PDGFRAP16234 RNU6-486P-201ENST00000363116 107 ntBASIC2.58□□□□□ -2
PDGFRAP16234 RNU6-384P-201ENST00000364900 104 ntBASIC2.58□□□□□ -2
PDGFRAP16234 RNU6-606P-201ENST00000384721 111 ntBASIC2.58□□□□□ -2
PDGFRAP16234 MIR10A-201ENST00000385043 110 ntBASIC2.58□□□□□ -2
PDGFRAP16234 U6atac.2-201ENST00000408644 118 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.58□□□□□ -2
PDGFRAP16234 AL353621.1-201ENST00000418219 243 ntBASIC2.58□□□□□ -2
PDGFRAP16234 BX276092.3-201ENST00000424182 230 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC000111.3-201ENST00000433478 193 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AL596276.1-201ENST00000434465 418 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AL513328.1-201ENST00000446460 224 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC011753.1-201ENST00000451001 220 ntBASIC2.58□□□□□ -2
PDGFRAP16234 MRPL42P6-201ENST00000486397 371 ntBASIC2.58□□□□□ -2
PDGFRAP16234 HMGB1P30-201ENST00000492455 606 ntBASIC2.58□□□□□ -2
PDGFRAP16234 RPL22P13-201ENST00000493291 347 ntBASIC2.58□□□□□ -2
PDGFRAP16234 RN7SKP298-201ENST00000515950 94 ntBASIC2.58□□□□□ -2
PDGFRAP16234 RNA5SP503-201ENST00000517047 117 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC010186.2-204ENST00000537668 439 ntBASIC2.58□□□□□ -2
PDGFRAP16234 SUB1P2-201ENST00000556401 297 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC023824.2-201ENST00000566185 400 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.58□□□□□ -2
PDGFRAP16234 AC060766.3-201ENST00000591442 263 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AL356575.1-201ENST00000603008 283 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC011890.2-201ENST00000613393 294 ntBASIC2.58□□□□□ -2
PDGFRAP16234 HMGB1P24-202ENST00000615653 685 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC024581.2-201ENST00000619986 252 ntBASIC2.58□□□□□ -2
PDGFRAP16234 AC136475.10-201ENST00000620253 385 ntBASIC2.58□□□□□ -2
PDGFRAP16234 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
PDGFRAP16234 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC2.57□□□□□ -2
PDGFRAP16234 RNU6-942P-201ENST00000363002 107 ntBASIC2.57□□□□□ -2
PDGFRAP16234 DEFA7P-201ENST00000382676 285 ntBASIC2.57□□□□□ -2
PDGFRAP16234 RNU6-1029P-201ENST00000384109 107 ntBASIC2.57□□□□□ -2
PDGFRAP16234 MIR518C-201ENST00000384822 101 ntBASIC2.57□□□□□ -2
PDGFRAP16234 MIR218-1-201ENST00000384999 110 ntBASIC2.57□□□□□ -2
PDGFRAP16234 SNORA11.2-201ENST00000408318 127 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC009963.1-201ENST00000417265 157 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC2.57□□□□□ -2
PDGFRAP16234 RPL30P4-201ENST00000429309 333 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.57□□□□□ -2
PDGFRAP16234 AC004869.2-201ENST00000436501 229 ntTSL 3 BASIC2.57□□□□□ -2
PDGFRAP16234 HIGD1AP2-201ENST00000446367 280 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AL162395.1-201ENST00000457882 422 ntBASIC2.57□□□□□ -2
PDGFRAP16234 RPL7P43-201ENST00000478876 753 ntBASIC2.57□□□□□ -2
PDGFRAP16234 RPL36AP48-201ENST00000485521 314 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC018437.1-201ENST00000492214 406 ntBASIC2.57□□□□□ -2
PDGFRAP16234 HMGB3P3-201ENST00000510526 400 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC2.57□□□□□ -2
PDGFRAP16234 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC2.57□□□□□ -2
PDGFRAP16234 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC2.57□□□□□ -2
PDGFRAP16234 AC104136.1-201ENST00000512969 394 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AP004607.1-201ENST00000524456 203 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AL355076.2-202ENST00000553754 574 ntTSL 4 BASIC2.57□□□□□ -2
PDGFRAP16234 AC073648.5-201ENST00000603502 305 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC008945.2-201ENST00000606056 604 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC245008.1-201ENST00000608123 476 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC069294.1-201ENST00000608397 350 ntBASIC2.57□□□□□ -2
PDGFRAP16234 AC023490.3-201ENST00000621762 358 ntTSL 3 BASIC2.57□□□□□ -2
PDGFRAP16234 AP000550.4-201ENST00000639507 358 ntTSL 3 BASIC2.57□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 80.2 ms