Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 EIF1P4-201ENST00000572664 335 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AC026271.5-201ENST00000577873 130 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC-0.25□□□□□ -2.45
TOP2AP11388 AC022432.1-201ENST00000595739 310 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AC019131.2-201ENST00000609071 870 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 AL391834.1-201ENST00000609609 560 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC-0.25□□□□□ -2.45
TOP2AP11388 MIR19B1-201ENST00000384829 87 ntBASIC-0.26□□□□□ -2.45
TOP2AP11388 RPS3AP1-201ENST00000413190 320 ntBASIC-0.26□□□□□ -2.45
TOP2AP11388 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC-0.26□□□□□ -2.45
TOP2AP11388 RPS15AP5-201ENST00000436276 388 ntBASIC-0.26□□□□□ -2.45
TOP2AP11388 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC-0.26□□□□□ -2.45
TOP2AP11388 SNORA4.4-201ENST00000515921 135 ntBASIC-0.26□□□□□ -2.45
TOP2AP11388 AC104365.3-201ENST00000587011 625 ntTSL 5 BASIC-0.26□□□□□ -2.45
TOP2AP11388 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC-0.26□□□□□ -2.45
TOP2AP11388 Y_RNA.136-201ENST00000363444 102 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 RNU6V-201ENST00000384105 107 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 RPS15AP38-201ENST00000413110 372 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 AL080284.1-201ENST00000434493 442 ntTSL 2 BASIC-0.27□□□□□ -2.45
TOP2AP11388 MTCO1P44-201ENST00000441935 243 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 LNCSRLR-201ENST00000490375 709 ntTSL 3 BASIC-0.27□□□□□ -2.45
TOP2AP11388 AC023794.1-201ENST00000504210 403 ntTSL 2 BASIC-0.27□□□□□ -2.45
TOP2AP11388 AL136520.1-202ENST00000555494 763 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 AC112220.3-201ENST00000605502 502 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 uc_338.14-201ENST00000613162 166 ntBASIC-0.27□□□□□ -2.45
TOP2AP11388 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC-0.27□□□□□ -2.45
TOP2AP11388 PPIL4-202ENST00000340881 1089 ntTSL 1 (best) BASIC-0.28□□□□□ -2.45
TOP2AP11388 RNU6-439P-201ENST00000384188 106 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 AC099677.1-201ENST00000420575 175 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 HSPE1P9-201ENST00000440046 311 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 AC013267.1-201ENST00000458227 267 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 MIR8063-201ENST00000621930 81 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 RNU6-302P-201ENST00000365249 107 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 RNU6-1083P-201ENST00000384022 107 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 Y_RNA.552-201ENST00000384665 112 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 U6atac.2-201ENST00000408644 118 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 BPY2DP-201ENST00000422208 265 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC-0.28□□□□□ -2.45
TOP2AP11388 AC104651.1-201ENST00000427559 735 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC-0.28□□□□□ -2.45
TOP2AP11388 AC092573.2-201ENST00000434546 243 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 MTCO1P18-201ENST00000455518 1419 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 AC090519.2-201ENST00000559034 655 ntTSL 5 BASIC-0.28□□□□□ -2.45
TOP2AP11388 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC-0.28□□□□□ -2.45
TOP2AP11388 MIR4645-201ENST00000583158 77 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 PCNAP1-202ENST00000595299 752 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 AC098614.4-201ENST00000607601 462 ntBASIC-0.28□□□□□ -2.45
TOP2AP11388 RNU4-78P-201ENST00000410940 126 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC-0.29□□□□□ -2.46
TOP2AP11388 AC132479.1-201ENST00000449160 144 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC-0.29□□□□□ -2.46
TOP2AP11388 SSR3-208ENST00000496050 579 ntTSL 4 BASIC-0.29□□□□□ -2.46
TOP2AP11388 SNORA14.1-201ENST00000516113 141 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 MIR3937-201ENST00000580135 106 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 AC068620.3-201ENST00000602749 560 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 MTND4LP5-201ENST00000605152 292 ntBASIC-0.29□□□□□ -2.46
TOP2AP11388 RNU6-270P-201ENST00000364131 105 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 DSTNP4-201ENST00000399472 474 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC-0.3□□□□□ -2.46
TOP2AP11388 MTCO2P20-201ENST00000437339 673 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 AC098869.1-201ENST00000481627 292 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 AC108729.1-201ENST00000487812 947 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC-0.3□□□□□ -2.46
TOP2AP11388 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC-0.3□□□□□ -2.46
TOP2AP11388 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC-0.3□□□□□ -2.46
TOP2AP11388 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC-0.3□□□□□ -2.46
TOP2AP11388 AC090578.1-201ENST00000604955 591 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 AL138963.2-201ENST00000605137 226 ntBASIC-0.3□□□□□ -2.46
TOP2AP11388 SNORD89-201ENST00000390981 114 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 AC139712.2-201ENST00000424302 339 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 LINC00345-201ENST00000443679 285 ntTSL 5 BASIC-0.31□□□□□ -2.46
TOP2AP11388 RNA5SP227-201ENST00000516184 113 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 AC139497.1-201ENST00000524042 501 ntTSL 5 BASIC-0.31□□□□□ -2.46
TOP2AP11388 SNORA77B-201ENST00000578179 125 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 RPL21P136-201ENST00000605378 396 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 AC093838.1-201ENST00000613014 469 ntBASIC-0.31□□□□□ -2.46
TOP2AP11388 CYLC1-201ENST00000329312 2106 ntAPPRIS P3 TSL 1 (best) BASIC-0.31□□□□□ -2.46
TOP2AP11388 AL355615.1-201ENST00000406187 641 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 MIR1283-2-201ENST00000408621 87 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 MTND4LP21-201ENST00000415303 295 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 PDCL2P1-201ENST00000419302 352 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC-0.32□□□□□ -2.46
TOP2AP11388 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC-0.32□□□□□ -2.46
TOP2AP11388 AC147055.4-201ENST00000504399 745 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 AC111000.5-201ENST00000506559 1178 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 AC007834.2-201ENST00000536310 343 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC-0.32□□□□□ -2.46
TOP2AP11388 AC008121.1-201ENST00000603244 268 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 AC092106.3-201ENST00000611308 722 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 AC009033.1-201ENST00000624279 431 ntBASIC-0.32□□□□□ -2.46
TOP2AP11388 RNA5SP264-201ENST00000363115 107 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 RNU2-63P-201ENST00000410792 194 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 MTND2P8-201ENST00000450555 1025 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 NDUFB4P10-201ENST00000452541 359 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC092757.1-201ENST00000467293 467 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC106892.1-201ENST00000491608 406 ntTSL 3 BASIC-0.33□□□□□ -2.46
TOP2AP11388 SNORA3.4-201ENST00000515969 96 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC090330.1-201ENST00000588646 764 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 AC100812.1-201ENST00000607622 580 ntBASIC-0.33□□□□□ -2.46
TOP2AP11388 CYP3A43-217ENST00000631161 328 ntTSL 5 BASIC-0.33□□□□□ -2.46
Retrieved 100 of 98,524 protein–RNA pairs in 112.7 ms