Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 5S_rRNA.18-201ENST00000621941 110 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC093648.1-201ENST00000623546 606 ntBASIC1.54□□□□□ -2.16
TPM1P09493 MTND5P42-201ENST00000637720 498 ntBASIC1.54□□□□□ -2.16
TPM1P09493 HAUS6P2-201ENST00000433254 2404 ntBASIC1.54□□□□□ -2.16
TPM1P09493 AC111000.4-202ENST00000505646 2648 ntTSL 2 BASIC1.53□□□□□ -2.16
TPM1P09493 ABCA5-201ENST00000392676 8220 ntAPPRIS P1 TSL 1 (best) BASIC1.53□□□□□ -2.16
TPM1P09493 RNU6-655P-201ENST00000362858 107 ntBASIC1.53□□□□□ -2.16
TPM1P09493 MIR758-201ENST00000390227 88 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC016831.2-201ENST00000417179 352 ntBASIC1.53□□□□□ -2.16
TPM1P09493 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM1P09493 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC1.53□□□□□ -2.16
TPM1P09493 AL024474.2-201ENST00000431309 501 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM1P09493 AC015922.2-201ENST00000435593 184 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AP000949.1-201ENST00000438328 629 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC012308.1-201ENST00000451232 178 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL121594.1-201ENST00000475906 575 ntBASIC1.53□□□□□ -2.16
TPM1P09493 MTND1P3-201ENST00000484956 952 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC079395.1-201ENST00000510981 262 ntBASIC1.53□□□□□ -2.16
TPM1P09493 RNA5SP216-201ENST00000516111 123 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM1P09493 COPS8P3-201ENST00000526024 482 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC018630.3-201ENST00000542637 96 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM1P09493 HIF1A-212ENST00000557538 3468 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TPM1P09493 ACTG1P17-203ENST00000561222 537 ntTSL 3 BASIC1.53□□□□□ -2.16
TPM1P09493 MIR3683-201ENST00000580847 82 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC012065.4-201ENST00000602445 679 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.6-201ENST00000603753 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.11-201ENST00000604059 253 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AC008162.1-201ENST00000604718 254 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.1-201ENST00000604752 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.2-201ENST00000604983 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.5-201ENST00000605253 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.4-201ENST00000605279 254 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.12-201ENST00000605291 253 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.8-201ENST00000605353 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL670379.7-201ENST00000605823 252 ntBASIC1.53□□□□□ -2.16
TPM1P09493 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.53□□□□□ -2.16
TPM1P09493 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC1.52□□□□□ -2.17
TPM1P09493 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.52□□□□□ -2.17
TPM1P09493 Y_RNA.500-201ENST00000384466 111 ntBASIC1.52□□□□□ -2.17
TPM1P09493 FCF1P10-201ENST00000407590 479 ntBASIC1.52□□□□□ -2.17
TPM1P09493 MTCO3P5-201ENST00000433620 714 ntBASIC1.52□□□□□ -2.17
TPM1P09493 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM1P09493 AC005908.1-201ENST00000468701 347 ntBASIC1.52□□□□□ -2.17
TPM1P09493 LINC02276-201ENST00000508388 138 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM1P09493 AP000907.2-201ENST00000530827 353 ntBASIC1.52□□□□□ -2.17
TPM1P09493 AL157871.3-201ENST00000557231 293 ntBASIC1.52□□□□□ -2.17
TPM1P09493 MIR4422-201ENST00000581938 83 ntBASIC1.52□□□□□ -2.17
TPM1P09493 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC1.52□□□□□ -2.17
TPM1P09493 AC131235.4-201ENST00000609288 620 ntBASIC1.52□□□□□ -2.17
TPM1P09493 MIR8074-201ENST00000615081 81 ntBASIC1.52□□□□□ -2.17
TPM1P09493 AC126544.2-201ENST00000625174 749 ntBASIC1.52□□□□□ -2.17
TPM1P09493 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC1.52□□□□□ -2.17
TPM1P09493 AC091812.1-201ENST00000432235 1948 ntBASIC1.51□□□□□ -2.17
TPM1P09493 RNU6-462P-201ENST00000362659 105 ntBASIC1.51□□□□□ -2.17
TPM1P09493 Y_RNA.67-201ENST00000362870 100 ntBASIC1.51□□□□□ -2.17
TPM1P09493 RNU6-944P-201ENST00000364023 107 ntBASIC1.51□□□□□ -2.17
TPM1P09493 SNORA4.3-201ENST00000365564 137 ntBASIC1.51□□□□□ -2.17
TPM1P09493 RNU6-203P-201ENST00000384038 104 ntBASIC1.51□□□□□ -2.17
TPM1P09493 TRAJ39-201ENST00000390498 63 ntAPPRIS P1 BASIC1.51□□□□□ -2.17
TPM1P09493 BTF3L4P2-201ENST00000392798 346 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AC119751.3-201ENST00000399720 670 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC1.51□□□□□ -2.17
TPM1P09493 UBE2V1P10-201ENST00000414685 269 ntBASIC1.51□□□□□ -2.17
TPM1P09493 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC1.51□□□□□ -2.17
TPM1P09493 ITGA9-AS1-208ENST00000449586 726 ntTSL 3 BASIC1.51□□□□□ -2.17
TPM1P09493 AL590365.1-201ENST00000450788 243 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AC109445.1-201ENST00000512356 383 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AC009754.1-201ENST00000566282 540 ntTSL 4 BASIC1.51□□□□□ -2.17
TPM1P09493 AC025678.1-201ENST00000567861 338 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.51□□□□□ -2.17
TPM1P09493 AL596327.1-201ENST00000603629 213 ntBASIC1.51□□□□□ -2.17
TPM1P09493 PRR13P7-201ENST00000605538 430 ntBASIC1.51□□□□□ -2.17
TPM1P09493 AL021368.1-201ENST00000607490 540 ntBASIC1.51□□□□□ -2.17
TPM1P09493 MIR7843-201ENST00000622274 79 ntBASIC1.51□□□□□ -2.17
TPM1P09493 BRDT-206ENST00000402388 3125 ntAPPRIS P3 TSL 1 (best) BASIC1.51□□□□□ -2.17
TPM1P09493 HFM1-201ENST00000370425 4931 ntAPPRIS P1 TSL 1 (best) BASIC1.5□□□□□ -2.17
TPM1P09493 Y_RNA.99-201ENST00000363138 105 ntBASIC1.5□□□□□ -2.17
TPM1P09493 RNU6-1210P-201ENST00000363775 107 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC1.5□□□□□ -2.17
TPM1P09493 RNU6-439P-201ENST00000384188 106 ntBASIC1.5□□□□□ -2.17
TPM1P09493 CBX3P9-201ENST00000402326 552 ntBASIC1.5□□□□□ -2.17
TPM1P09493 RPL30P13-201ENST00000418873 348 ntBASIC1.5□□□□□ -2.17
TPM1P09493 RPS25P9-201ENST00000435591 252 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM1P09493 AL606517.1-201ENST00000446914 387 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AC021146.8-201ENST00000507455 733 ntBASIC1.5□□□□□ -2.17
TPM1P09493 RNVU1-2-201ENST00000516326 135 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC1.5□□□□□ -2.17
TPM1P09493 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC1.5□□□□□ -2.17
TPM1P09493 AC009712.1-201ENST00000564938 316 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AC015720.1-201ENST00000565251 277 ntBASIC1.5□□□□□ -2.17
TPM1P09493 MIR1273C-201ENST00000578669 77 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AF131215.7-201ENST00000602443 707 ntBASIC1.5□□□□□ -2.17
TPM1P09493 ZNRD1-AS1_3.8-201ENST00000611686 104 ntBASIC1.5□□□□□ -2.17
TPM1P09493 AL365204.3-201ENST00000612448 685 ntBASIC1.5□□□□□ -2.17
TPM1P09493 DLEU1_2.1-201ENST00000617920 342 ntBASIC1.5□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms