Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 AC116353.2-201ENST00000505332 712 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC4P09017 MRPS36P2-201ENST00000512569 299 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 SCARNA24.1-201ENST00000516465 137 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC4P09017 OR5AQ1P-201ENST00000527596 927 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC4P09017 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC2.2□□□□□ -2.06
HOXC4P09017 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 AL133153.1-201ENST00000557756 303 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC2.2□□□□□ -2.06
HOXC4P09017 KC877982.1-201ENST00000602313 470 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC025449.1-201ENST00000603896 529 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 Z84480.1-201ENST00000605131 311 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AP002360.4-201ENST00000606980 481 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 uc_338.12-201ENST00000616344 181 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC4P09017 AC010722.1-201ENST00000622595 582 ntTSL 5 BASIC2.2□□□□□ -2.06
HOXC4P09017 AC139792.3-201ENST00000623525 224 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 AC080100.1-201ENST00000624239 5356 ntBASIC2.2□□□□□ -2.06
HOXC4P09017 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.2□□□□□ -2.06
HOXC4P09017 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC4P09017 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC4P09017 HAS2-201ENST00000303924 4190 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC4P09017 RNU5A-8P-201ENST00000364102 114 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 RNU6-461P-201ENST00000364195 107 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 SNORA23-201ENST00000365128 182 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 RNU6-456P-201ENST00000384493 107 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC2.19□□□□□ -2.06
HOXC4P09017 AL109755.1-201ENST00000401791 649 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 CIR1P3-201ENST00000405137 479 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AL160162.1-202ENST00000417654 244 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC4P09017 ELOCP4-201ENST00000420090 333 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC4P09017 AL353572.1-201ENST00000442490 417 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC4P09017 RPL23AP41-201ENST00000484754 458 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 SUMO2P6-201ENST00000505273 288 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC4P09017 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC4P09017 HSPE1P18-201ENST00000517602 280 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC2.19□□□□□ -2.06
HOXC4P09017 COX6CP5-201ENST00000527162 228 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC4P09017 AC079584.2-201ENST00000548756 515 ntTSL 3 BASIC2.19□□□□□ -2.06
HOXC4P09017 AC025030.2-201ENST00000552558 567 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC4P09017 AL049775.2-201ENST00000557547 558 ntTSL 4 BASIC2.19□□□□□ -2.06
HOXC4P09017 PCLAF-207ENST00000559519 749 ntTSL 2 BASIC2.19□□□□□ -2.06
HOXC4P09017 HMGB1P33-201ENST00000563485 527 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AC090616.3-201ENST00000582184 217 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AC017083.3-201ENST00000609955 700 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC4P09017 DCAF17-212ENST00000611110 975 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
HOXC4P09017 AC073534.2-201ENST00000620377 381 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 MIR6132-201ENST00000622083 109 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 MIR6873-201ENST00000622788 63 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 ZNF355P-201ENST00000427301 3216 ntBASIC2.19□□□□□ -2.06
HOXC4P09017 ERBIN-202ENST00000380935 6692 ntTSL 5 BASIC2.19□□□□□ -2.06
HOXC4P09017 AC004520.1-201ENST00000608362 1413 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC4P09017 Y_RNA.9-201ENST00000362354 101 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 RNY4P14-201ENST00000363656 96 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 Y_RNA.453-201ENST00000384223 109 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 MIR524-201ENST00000385242 87 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 RNU2-9P-201ENST00000410194 145 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 RNU2-8P-201ENST00000410727 190 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXC4P09017 MTCO1P20-201ENST00000425366 358 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 AC007919.1-201ENST00000429380 217 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.18□□□□□ -2.06
HOXC4P09017 RPL35AP22-201ENST00000436855 335 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 AL136380.1-201ENST00000447970 162 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 AL359095.1-201ENST00000457383 635 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXC4P09017 AC023194.1-201ENST00000493084 308 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 SCARNA16.3-201ENST00000516595 184 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 Y_RNA.693-201ENST00000516641 110 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 RNU6-64P-201ENST00000517119 105 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 NRON-201ENST00000517270 370 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 IGKV3-31-201ENST00000523109 329 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.18□□□□□ -2.06
HOXC4P09017 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 ARL2BPP2-201ENST00000550907 489 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AL512360.1-201ENST00000555346 234 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC2.18□□□□□ -2.06
HOXC4P09017 AC005951.2-201ENST00000576282 495 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 SNORA59B-202ENST00000578183 701 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 MIR3616-201ENST00000584070 92 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 MIR4293-201ENST00000584305 78 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AC022306.2-201ENST00000617563 647 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 AC019226.1-201ENST00000625666 515 ntBASIC2.18□□□□□ -2.06
HOXC4P09017 MTND1P37-201ENST00000636562 264 ntBASIC2.18□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms