Protein–RNA interactions for Protein: P08670

VIM, Vimentin, humanhuman

Known RBP Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VIMP08670 MTCYBP33-201ENST00000575007 1130 ntBASIC2.51□□□□□ -2.01
VIMP08670 MIR5571-201ENST00000577998 113 ntBASIC2.51□□□□□ -2.01
VIMP08670 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC2.51□□□□□ -2.01
VIMP08670 MIR4444-1-201ENST00000581696 74 ntBASIC2.51□□□□□ -2.01
VIMP08670 MIR4444-2-201ENST00000584390 74 ntBASIC2.51□□□□□ -2.01
VIMP08670 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC2.51□□□□□ -2.01
VIMP08670 CYLC1-202ENST00000621735 379 ntAPPRIS ALT2 TSL 3 BASIC2.51□□□□□ -2.01
VIMP08670 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC2.51□□□□□ -2.01
VIMP08670 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.51□□□□□ -2.01
VIMP08670 ZNF680P1-201ENST00000436625 1469 ntBASIC2.51□□□□□ -2.01
VIMP08670 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.51□□□□□ -2.01
VIMP08670 CAPS2-203ENST00000393284 3430 ntAPPRIS P1 TSL 1 (best) BASIC2.51□□□□□ -2.01
VIMP08670 AL596028.1-201ENST00000326971 197 ntBASIC2.5□□□□□ -2.01
VIMP08670 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC2.5□□□□□ -2.01
VIMP08670 Y_RNA.51-201ENST00000362725 102 ntBASIC2.5□□□□□ -2.01
VIMP08670 RNU6-1120P-201ENST00000362988 108 ntBASIC2.5□□□□□ -2.01
VIMP08670 RNU1-112P-201ENST00000364401 164 ntBASIC2.5□□□□□ -2.01
VIMP08670 RNU6-715P-201ENST00000365204 103 ntBASIC2.5□□□□□ -2.01
VIMP08670 U6atac.2-201ENST00000408644 118 ntBASIC2.5□□□□□ -2.01
VIMP08670 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 RPL35AP12-201ENST00000425362 338 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.5□□□□□ -2.01
VIMP08670 AL031659.1-201ENST00000447075 539 ntBASIC2.5□□□□□ -2.01
VIMP08670 MTND1P18-201ENST00000448191 573 ntBASIC2.5□□□□□ -2.01
VIMP08670 AL118520.1-201ENST00000450770 291 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.5□□□□□ -2.01
VIMP08670 AC080013.2-201ENST00000460866 323 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.5□□□□□ -2.01
VIMP08670 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.5□□□□□ -2.01
VIMP08670 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 FAM92A1P1-201ENST00000528023 890 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC079598.5-201ENST00000547460 117 ntBASIC2.5□□□□□ -2.01
VIMP08670 RPS3AP23-202ENST00000574601 686 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 MIR5195-201ENST00000583555 115 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC100778.1-201ENST00000583579 332 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.5□□□□□ -2.01
VIMP08670 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.5□□□□□ -2.01
VIMP08670 AC008536.2-201ENST00000607284 349 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC024581.2-201ENST00000619986 252 ntBASIC2.5□□□□□ -2.01
VIMP08670 AC244517.12-201ENST00000623581 663 ntBASIC2.5□□□□□ -2.01
VIMP08670 ATM-228ENST00000639240 498 ntTSL 5 BASIC2.5□□□□□ -2.01
VIMP08670 ATM-230ENST00000640388 578 ntTSL 5 BASIC2.5□□□□□ -2.01
VIMP08670 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VIMP08670 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VIMP08670 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.5□□□□□ -2.01
VIMP08670 AMY2B-208ENST00000610648 1736 ntAPPRIS P1 TSL 1 (best) BASIC2.5□□□□□ -2.01
VIMP08670 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.5□□□□□ -2.01
VIMP08670 RBBP8P1-201ENST00000449447 1844 ntBASIC2.49□□□□□ -2.01
VIMP08670 AC138393.1-203ENST00000327086 343 ntBASIC2.49□□□□□ -2.01
VIMP08670 SNORA71.3-201ENST00000362582 128 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNA5SP374-201ENST00000362939 125 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNU6-1119P-201ENST00000384349 108 ntBASIC2.49□□□□□ -2.01
VIMP08670 MIR23B-201ENST00000384832 97 ntBASIC2.49□□□□□ -2.01
VIMP08670 AL356057.3-201ENST00000402607 340 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNU2-3P-201ENST00000410144 191 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNU4-46P-201ENST00000410818 138 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNA5SP21-201ENST00000410917 96 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNU6-607P-201ENST00000411283 108 ntBASIC2.49□□□□□ -2.01
VIMP08670 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 AC087499.2-201ENST00000432861 149 ntBASIC2.49□□□□□ -2.01
VIMP08670 AL691515.1-201ENST00000432976 733 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 MTATP6P26-201ENST00000445926 662 ntBASIC2.49□□□□□ -2.01
VIMP08670 RPS3AP17-201ENST00000472594 777 ntBASIC2.49□□□□□ -2.01
VIMP08670 AC079382.1-201ENST00000493346 557 ntBASIC2.49□□□□□ -2.01
VIMP08670 AC093534.1-201ENST00000504977 132 ntBASIC2.49□□□□□ -2.01
VIMP08670 AC104136.1-201ENST00000512969 394 ntBASIC2.49□□□□□ -2.01
VIMP08670 AC010493.1-201ENST00000513479 292 ntBASIC2.49□□□□□ -2.01
VIMP08670 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.49□□□□□ -2.01
VIMP08670 MTND1P15-201ENST00000579262 949 ntBASIC2.49□□□□□ -2.01
VIMP08670 NBR2-204ENST00000587322 63 ntBASIC2.49□□□□□ -2.01
VIMP08670 BNIP3P30-201ENST00000601184 574 ntBASIC2.49□□□□□ -2.01
VIMP08670 RNU6-91P-201ENST00000607774 107 ntBASIC2.49□□□□□ -2.01
VIMP08670 RMST_4.1-201ENST00000616886 107 ntBASIC2.49□□□□□ -2.01
VIMP08670 uc_338.11-201ENST00000619132 160 ntBASIC2.49□□□□□ -2.01
VIMP08670 MIR8057-201ENST00000620957 69 ntBASIC2.49□□□□□ -2.01
VIMP08670 SCARNA4-202ENST00000625402 129 ntBASIC2.49□□□□□ -2.01
VIMP08670 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC2.49□□□□□ -2.01
VIMP08670 AC073346.2-201ENST00000624724 2058 ntBASIC2.49□□□□□ -2.01
VIMP08670 ANP32E-209ENST00000616917 2989 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.49□□□□□ -2.01
VIMP08670 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.48□□□□□ -2.01
VIMP08670 SNORA18.3-201ENST00000384122 132 ntBASIC2.48□□□□□ -2.01
VIMP08670 MIR9-1-201ENST00000385198 89 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC068050.1-201ENST00000394891 380 ntBASIC2.48□□□□□ -2.01
VIMP08670 GSTA9P-201ENST00000406231 611 ntBASIC2.48□□□□□ -2.01
VIMP08670 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.48□□□□□ -2.01
VIMP08670 CTNNA2-204ENST00000409266 432 ntTSL 3 BASIC2.48□□□□□ -2.01
VIMP08670 TOMM20P4-201ENST00000427861 435 ntBASIC2.48□□□□□ -2.01
VIMP08670 AL669831.1-202ENST00000428504 417 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC073464.1-201ENST00000429823 534 ntBASIC2.48□□□□□ -2.01
VIMP08670 GTF2IP13-201ENST00000438487 386 ntBASIC2.48□□□□□ -2.01
VIMP08670 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.48□□□□□ -2.01
VIMP08670 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC2.48□□□□□ -2.01
VIMP08670 IPO7P1-201ENST00000442031 636 ntBASIC2.48□□□□□ -2.01
VIMP08670 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.48□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 151.5 ms