Protein–RNA interactions for Protein: O95602

POLR1A, DNA-directed RNA polymerase I subunit RPA1, humanhuman

Predicted RBP Predictions only

Length 1,720 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1AO95602 AL139098.1-201ENST00000407291 389 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 USP9YP19-201ENST00000412165 485 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC0.33□□□□□ -2.36
POLR1AO95602 USP9YP13-201ENST00000417797 480 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 C1DP1-201ENST00000426049 402 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AL592447.1-201ENST00000447592 540 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 TRBVA-201ENST00000498804 316 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC009930.1-201ENST00000522330 191 ntTSL 5 BASIC0.33□□□□□ -2.36
POLR1AO95602 CENPUP1-201ENST00000526649 1202 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 VN1R82P-201ENST00000601481 356 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC025588.3-201ENST00000604182 274 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC0.33□□□□□ -2.36
POLR1AO95602 CXorf66-201ENST00000370540 1281 ntAPPRIS P1 TSL 1 (best) BASIC0.33□□□□□ -2.36
POLR1AO95602 MIR1303-201ENST00000408625 86 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 RNU2-64P-201ENST00000411315 191 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC0.33□□□□□ -2.36
POLR1AO95602 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.33□□□□□ -2.36
POLR1AO95602 CYP2C59P-201ENST00000457790 269 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC092757.1-201ENST00000467293 467 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC0.33□□□□□ -2.36
POLR1AO95602 BOLA3P3-201ENST00000505182 232 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AC093766.1-202ENST00000513400 718 ntTSL 3 BASIC0.33□□□□□ -2.36
POLR1AO95602 RNU5A-7P-201ENST00000515979 116 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 ELOCP5-201ENST00000604924 333 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AL161716.1-201ENST00000606365 273 ntTSL 5 BASIC0.33□□□□□ -2.36
POLR1AO95602 AL022345.1-201ENST00000607292 135 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 AL138726.1-201ENST00000614873 333 ntBASIC0.33□□□□□ -2.36
POLR1AO95602 SNORD33-201ENST00000362761 85 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC0.32□□□□□ -2.36
POLR1AO95602 AC064871.1-202ENST00000413954 382 ntTSL 5 BASIC0.32□□□□□ -2.36
POLR1AO95602 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC0.32□□□□□ -2.36
POLR1AO95602 RPL36P19-201ENST00000430744 301 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 RAC1P7-201ENST00000445367 377 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 AC104692.1-201ENST00000472406 90 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 AC124293.1-201ENST00000530034 493 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 AC090510.1-201ENST00000567456 425 ntTSL 3 BASIC0.32□□□□□ -2.36
POLR1AO95602 AC073544.2-201ENST00000601155 540 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 AC027335.2-201ENST00000624030 375 ntBASIC0.32□□□□□ -2.36
POLR1AO95602 RNA5SP327-201ENST00000362494 101 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 SNORA25-201ENST00000384384 134 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC0.31□□□□□ -2.36
POLR1AO95602 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
POLR1AO95602 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC0.31□□□□□ -2.36
POLR1AO95602 AC108729.1-201ENST00000487812 947 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 RPL22P13-201ENST00000493291 347 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 POC1B-211ENST00000549504 581 ntTSL 5 BASIC0.31□□□□□ -2.36
POLR1AO95602 AL391813.1-201ENST00000603098 260 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 AL589743.7-201ENST00000612637 233 ntBASIC0.31□□□□□ -2.36
POLR1AO95602 USP12-203ENST00000620323 349 ntTSL 3 BASIC0.31□□□□□ -2.36
POLR1AO95602 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.31□□□□□ -2.36
POLR1AO95602 UBE2Q2P1-202ENST00000354771 883 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 RNU6-98P-201ENST00000384173 107 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC0.3□□□□□ -2.36
POLR1AO95602 LINC01203-202ENST00000456091 476 ntTSL 3 BASIC0.3□□□□□ -2.36
POLR1AO95602 AC114982.1-201ENST00000469402 321 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 OR5AK1P-201ENST00000524837 922 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AP003034.1-201ENST00000534621 422 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 LINC02384-205ENST00000539404 785 ntTSL 3 BASIC0.3□□□□□ -2.36
POLR1AO95602 AC002400.1-201ENST00000569310 726 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AC015688.2-201ENST00000584523 262 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AC080013.4-201ENST00000607624 649 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR1AO95602 FAM206A-202ENST00000374624 499 ntTSL 3 BASIC0.3□□□□□ -2.36
POLR1AO95602 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC0.3□□□□□ -2.36
POLR1AO95602 MTCO3P5-201ENST00000433620 714 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AP1S2P1-201ENST00000457344 379 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 SNORD19.2-201ENST00000516978 73 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AC021739.1-201ENST00000559631 174 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 AC091132.5-202ENST00000587078 501 ntTSL 3 BASIC0.3□□□□□ -2.36
POLR1AO95602 AL021879.1-201ENST00000611756 288 ntBASIC0.3□□□□□ -2.36
POLR1AO95602 SNORD114-15-201ENST00000364687 72 ntBASIC0.29□□□□□ -2.36
POLR1AO95602 MIR329-1-201ENST00000385028 80 ntBASIC0.29□□□□□ -2.36
POLR1AO95602 RNU6-360P-201ENST00000390944 104 ntBASIC0.29□□□□□ -2.36
POLR1AO95602 AC013267.1-201ENST00000458227 267 ntBASIC0.29□□□□□ -2.36
POLR1AO95602 AC067904.2-201ENST00000517322 1283 ntBASIC0.29□□□□□ -2.36
POLR1AO95602 MIR888-201ENST00000401186 77 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 BPY2DP-201ENST00000422208 265 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC0.28□□□□□ -2.36
POLR1AO95602 MTND5P14-201ENST00000441481 1267 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 AC008539.1-201ENST00000507653 482 ntTSL 3 BASIC0.28□□□□□ -2.36
POLR1AO95602 RNU6-27P-201ENST00000516146 107 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 MAL2-206ENST00000522187 547 ntTSL 4 BASIC0.28□□□□□ -2.36
POLR1AO95602 HSPA8P13-201ENST00000523715 472 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 OR6C68-201ENST00000548615 939 ntAPPRIS P1 BASIC0.28□□□□□ -2.36
POLR1AO95602 AC125611.1-201ENST00000549563 229 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 AL022345.2-201ENST00000606307 135 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 AC004492.1-201ENST00000607036 742 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 HOTAIR_3.1-201ENST00000611352 97 ntBASIC0.28□□□□□ -2.36
POLR1AO95602 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC0.28□□□□□ -2.36
POLR1AO95602 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
POLR1AO95602 PTPN22-206ENST00000525799 2118 ntTSL 1 (best) BASIC0.28□□□□□ -2.36
POLR1AO95602 CHST9-202ENST00000581714 2043 ntAPPRIS P1 TSL 1 (best) BASIC0.27□□□□□ -2.37
POLR1AO95602 MIR1267-201ENST00000408723 78 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 RNA5SP501-201ENST00000410990 112 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AC004865.1-201ENST00000442276 1003 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AC073127.1-201ENST00000447336 333 ntTSL 3 BASIC0.27□□□□□ -2.37
POLR1AO95602 LINC01765-201ENST00000448680 491 ntTSL 2 BASIC0.27□□□□□ -2.37
POLR1AO95602 AC002350.1-201ENST00000490759 375 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AL163195.1-201ENST00000496941 348 ntBASIC0.27□□□□□ -2.37
POLR1AO95602 AC025465.3-201ENST00000510570 311 ntBASIC0.27□□□□□ -2.37
Retrieved 100 of 98,524 protein–RNA pairs in 106.9 ms