Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MIPOL1-203ENST00000537471 5954 ntAPPRIS P1 TSL 5 BASIC1.51□□□□□ -2.17
UPK1BO75841 AC062016.1-201ENST00000355719 319 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 MIR208A-201ENST00000362287 71 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 SNORD14B-201ENST00000364533 90 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 RNU6-622P-201ENST00000384272 103 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 RNU6-39P-201ENST00000384344 107 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 MIR491-201ENST00000384877 84 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK1BO75841 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK1BO75841 CISD1P1-201ENST00000393907 327 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 MIR1262-201ENST00000408276 93 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 MIR1283-2-201ENST00000408621 87 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 RPL22P18-201ENST00000417197 377 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AC244636.1-201ENST00000421152 228 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 BX510359.4-201ENST00000423750 193 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 LINC00459-201ENST00000431656 376 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK1BO75841 OPA1-AS1-201ENST00000433105 492 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 SPIN4-AS1-201ENST00000451979 426 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK1BO75841 AL358075.2-201ENST00000452785 339 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK1BO75841 snoU109.1-201ENST00000459339 135 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AL121594.1-201ENST00000475906 575 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC1.51□□□□□ -2.17
UPK1BO75841 AC112204.1-201ENST00000502591 103 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 AC096745.1-201ENST00000509945 370 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 RNU6-123P-201ENST00000516163 102 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 RNU6-965P-201ENST00000516721 96 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 CR383656.8-201ENST00000549046 145 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AC020891.3-201ENST00000560011 363 ntTSL 3 BASIC1.51□□□□□ -2.17
UPK1BO75841 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC1.51□□□□□ -2.17
UPK1BO75841 AL078605.1-201ENST00000603529 500 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AL359547.2-201ENST00000615810 418 ntBASIC1.51□□□□□ -2.17
UPK1BO75841 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.51□□□□□ -2.17
UPK1BO75841 RNU6-212P-201ENST00000362642 104 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 RNU6-655P-201ENST00000362858 107 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 RNU4-1-201ENST00000363925 141 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 RNU6-944P-201ENST00000364023 107 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 RNU4-42P-201ENST00000364738 142 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 SNORA70.4-201ENST00000365509 134 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 RNU6-1179P-201ENST00000384667 107 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 MIR578-201ENST00000384828 96 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 UBE2V1P2-201ENST00000397758 440 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AL023284.1-201ENST00000403956 276 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC1.5□□□□□ -2.17
UPK1BO75841 HMGN2P3-201ENST00000433603 273 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 LINC02336-201ENST00000434117 330 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1BO75841 HMGN2P5-201ENST00000436882 273 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC010587.1-201ENST00000505809 469 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC079349.1-201ENST00000509096 589 ntTSL 2 BASIC1.5□□□□□ -2.17
UPK1BO75841 AC107393.1-201ENST00000512403 346 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 OCIAD1-AS1-201ENST00000513576 265 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1BO75841 Y_RNA.687-201ENST00000516558 91 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 EEF1A1P37-201ENST00000522748 715 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AP005660.1-201ENST00000522972 293 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC090124.2-201ENST00000527727 563 ntTSL 4 BASIC1.5□□□□□ -2.17
UPK1BO75841 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1BO75841 AC091489.2-201ENST00000566263 604 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 MIR4319-201ENST00000577285 85 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 LARP7P3-201ENST00000579888 337 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC068944.2-201ENST00000610373 403 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC1.5□□□□□ -2.17
UPK1BO75841 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC005296.1-201ENST00000616145 209 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AL359314.1-201ENST00000616913 261 ntBASIC1.5□□□□□ -2.17
UPK1BO75841 AC008555.8-201ENST00000623602 2168 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1BO75841 KIAA1107-201ENST00000370378 4622 ntTSL 5 BASIC1.49□□□□□ -2.17
UPK1BO75841 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK1BO75841 AC073343.1-201ENST00000328239 651 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 RNU5F-6P-201ENST00000362979 116 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 SNORD113-6-201ENST00000363345 75 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 RNU6-743P-201ENST00000364151 106 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 OR51A4-201ENST00000380373 1002 ntAPPRIS P1 BASIC1.49□□□□□ -2.17
UPK1BO75841 RNU6-546P-201ENST00000383991 107 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 SNORA8-201ENST00000384574 139 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 SNORA40.19-201ENST00000390846 128 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 MTCYBP36-201ENST00000404146 440 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL356432.1-201ENST00000405809 419 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.49□□□□□ -2.17
UPK1BO75841 AL031779.1-201ENST00000415663 330 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 HSPE1P21-201ENST00000438283 308 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC025750.2-201ENST00000442609 450 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL606662.1-201ENST00000445763 553 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AL590365.1-201ENST00000450788 243 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC004936.1-201ENST00000451755 361 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1BO75841 SATB1-AS1-204ENST00000453361 726 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1BO75841 LINC01075-201ENST00000455977 370 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1BO75841 PRELID3BP1-201ENST00000457142 540 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AP001486.1-201ENST00000463339 476 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC034244.1-201ENST00000507687 207 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC108078.2-201ENST00000510750 236 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1BO75841 RNU4-29P-201ENST00000515943 174 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 RNU6-311P-201ENST00000516224 102 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC109329.1-201ENST00000518744 317 ntBASIC1.49□□□□□ -2.17
UPK1BO75841 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.49□□□□□ -2.17
UPK1BO75841 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC1.49□□□□□ -2.17
Retrieved 100 of 98,524 protein–RNA pairs in 162.8 ms