Protein–RNA interactions for Protein: O75161

NPHP4, Nephrocystin-4, humanhuman

Predicted RBP Predictions only

Length 1,426 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4O75161 AL450336.1-201ENST00000605180 586 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AL158042.1-201ENST00000605338 460 ntBASIC1.79□□□□□ -2.12
NPHP4O75161 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC1.79□□□□□ -2.12
NPHP4O75161 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC1.78□□□□□ -2.12
NPHP4O75161 RNU6-462P-201ENST00000362659 105 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 SNORA4.1-201ENST00000364263 144 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 RNU4-68P-201ENST00000364314 141 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 RNU6-701P-201ENST00000384059 107 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 PIGPP2-201ENST00000411569 458 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 VPS26BP1-201ENST00000417155 755 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 ZNF90P2-204ENST00000419323 1075 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.78□□□□□ -2.12
NPHP4O75161 AC104651.1-201ENST00000427559 735 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 MICF-203ENST00000432679 129 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 PTENP1-201ENST00000447117 1215 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC1.78□□□□□ -2.12
NPHP4O75161 AC092264.1-201ENST00000456002 713 ntTSL 5 BASIC1.78□□□□□ -2.12
NPHP4O75161 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC1.78□□□□□ -2.12
NPHP4O75161 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.78□□□□□ -2.12
NPHP4O75161 IGLVVI-22-1-201ENST00000521183 211 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 LINC01608-201ENST00000523557 544 ntTSL 4 BASIC1.78□□□□□ -2.12
NPHP4O75161 AP004607.1-201ENST00000524456 203 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 BLOC1S6-207ENST00000565216 573 ntTSL 3 BASIC1.78□□□□□ -2.12
NPHP4O75161 MIR5000-201ENST00000577717 103 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 MIR544B-201ENST00000582372 78 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 AL449363.1-201ENST00000617815 186 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 AL162373.1-201ENST00000620433 407 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 AP002791.1-201ENST00000623291 381 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 AC099786.3-201ENST00000565735 1410 ntBASIC1.78□□□□□ -2.12
NPHP4O75161 SERPINI2-209ENST00000616363 1769 ntTSL 5 BASIC1.77□□□□□ -2.13
NPHP4O75161 NACAP2-201ENST00000318548 624 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 RN7SKP266-201ENST00000410232 287 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 RPS20P15-201ENST00000412792 311 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP4O75161 ISCA1P1-201ENST00000426679 387 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP4O75161 MTND3P1-201ENST00000441336 220 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC092001.1-201ENST00000453012 261 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC134050.1-201ENST00000495088 933 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 RNU7-193P-201ENST00000516723 65 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.77□□□□□ -2.13
NPHP4O75161 FAM96A-206ENST00000559950 561 ntTSL 2 BASIC1.77□□□□□ -2.13
NPHP4O75161 AC018767.1-201ENST00000566236 405 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP4O75161 RN7SL793P-201ENST00000583259 296 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC1.77□□□□□ -2.13
NPHP4O75161 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC1.77□□□□□ -2.13
NPHP4O75161 AC091057.3-201ENST00000602684 733 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NPHP4O75161 AC069294.1-201ENST00000608397 350 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AL109620.1-201ENST00000618738 1197 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC009269.6-201ENST00000621778 588 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AP002371.2-201ENST00000624450 503 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AP000720.1-201ENST00000625091 483 ntBASIC1.77□□□□□ -2.13
NPHP4O75161 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC1.77□□□□□ -2.13
NPHP4O75161 AC008781.2-201ENST00000502205 2480 ntTSL 1 (best) BASIC1.77□□□□□ -2.13
NPHP4O75161 Y_RNA.30-201ENST00000362572 97 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU6-433P-201ENST00000363216 104 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU6-288P-201ENST00000363690 104 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 SNORA16B-201ENST00000364674 135 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU6-723P-201ENST00000383973 107 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 NDUFS5P1-201ENST00000405668 289 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU2-32P-201ENST00000411193 191 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 AC074117.2-201ENST00000417130 397 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 snoU109.3-201ENST00000459477 145 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 LINC02046-202ENST00000481334 390 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 AC023790.1-201ENST00000482174 347 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 HTN1-204ENST00000511674 623 ntAPPRIS P1 TSL 2 BASIC1.76□□□□□ -2.13
NPHP4O75161 SMURF2P1-201ENST00000514992 481 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU6-703P-201ENST00000516946 107 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC1.76□□□□□ -2.13
NPHP4O75161 UTP23-205ENST00000520733 369 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 CYCSP26-201ENST00000534107 320 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 AC126407.1-201ENST00000563044 566 ntTSL 4 BASIC1.76□□□□□ -2.13
NPHP4O75161 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC1.76□□□□□ -2.13
NPHP4O75161 AC105245.1-201ENST00000581934 244 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 BNIP3P23-201ENST00000599655 511 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 AC112220.3-201ENST00000605502 502 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 AL355472.4-201ENST00000610233 626 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 MIR7157-201ENST00000635801 60 ntBASIC1.76□□□□□ -2.13
NPHP4O75161 RNU6-19P-201ENST00000384718 107 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 RNU6-1105P-201ENST00000384774 107 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 MIR147B-201ENST00000390185 80 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AL133475.1-201ENST00000404414 305 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 RNU6-757P-201ENST00000410334 100 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC1.75□□□□□ -2.13
NPHP4O75161 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC1.75□□□□□ -2.13
NPHP4O75161 PGBD4P6-201ENST00000421501 610 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 EIF4EP4-201ENST00000424916 578 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.75□□□□□ -2.13
NPHP4O75161 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC1.75□□□□□ -2.13
NPHP4O75161 RPL37P6-201ENST00000460682 294 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.75□□□□□ -2.13
NPHP4O75161 ZFAND1-217ENST00000521895 885 ntTSL 3 BASIC1.75□□□□□ -2.13
NPHP4O75161 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC1.75□□□□□ -2.13
NPHP4O75161 AP006587.4-201ENST00000526053 529 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC013828.2-201ENST00000532487 235 ntBASIC1.75□□□□□ -2.13
NPHP4O75161 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC1.75□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms