Protein–RNA interactions for Protein: O43395

PRPF3, U4/U6 small nuclear ribonucleoprotein Prp3, humanhuman

Known RBP Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3O43395 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC3.6□□□□□ -1.83
PRPF3O43395 AL161651.1-201ENST00000440882 223 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC124916.1-201ENST00000444020 547 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 AC083904.1-201ENST00000487828 231 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 LINC02494-201ENST00000509824 427 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF3O43395 MDM2-221ENST00000517852 393 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
PRPF3O43395 AC090136.1-201ENST00000520009 240 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC068657.1-201ENST00000520807 306 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AP000763.2-201ENST00000540641 163 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC3.6□□□□□ -1.83
PRPF3O43395 AL121821.1-201ENST00000557067 530 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF3O43395 AC010653.1-201ENST00000571108 881 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC100830.2-201ENST00000581636 240 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF3O43395 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC3.6□□□□□ -1.83
PRPF3O43395 BX546450.2-201ENST00000602419 435 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 AC024153.1-201ENST00000603103 365 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AL355376.2-201ENST00000603866 267 ntTSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 ATP1B3P1-201ENST00000605365 821 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC002044.1-201ENST00000606707 158 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 RNU6-91P-201ENST00000607774 107 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC3.6□□□□□ -1.83
PRPF3O43395 DLEU2_6.2-201ENST00000620994 136 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 AL136221.1-201ENST00000621449 509 ntBASIC3.6□□□□□ -1.83
PRPF3O43395 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.6□□□□□ -1.83
PRPF3O43395 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF3O43395 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.59□□□□□ -1.83
PRPF3O43395 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRPF3O43395 PLOD2-204ENST00000461497 3043 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF3O43395 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC3.59□□□□□ -1.83
PRPF3O43395 Y_RNA.167-201ENST00000363735 109 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 Y_RNA.212-201ENST00000364177 102 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 RNU6-898P-201ENST00000365627 104 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 Y_RNA.414-201ENST00000384011 101 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 SNORA32.2-201ENST00000384049 122 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 RNU6-214P-201ENST00000384130 107 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AC023141.4-201ENST00000412031 328 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 NCOR1P3-201ENST00000420479 303 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF3O43395 AL513365.2-201ENST00000423060 529 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF3O43395 MTCO3P46-201ENST00000425787 232 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 PTGES3P4-201ENST00000426243 356 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF3O43395 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.59□□□□□ -1.83
PRPF3O43395 AC098614.3-201ENST00000438957 440 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC3.59□□□□□ -1.83
PRPF3O43395 OSTCP8-201ENST00000445117 448 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 PMCHL2-203ENST00000457791 237 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.59□□□□□ -1.83
PRPF3O43395 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
PRPF3O43395 AC116655.1-201ENST00000508324 901 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 BTF3P12-201ENST00000519620 469 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AC087241.2-201ENST00000535801 324 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 CR383656.8-201ENST00000549046 145 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL121821.2-201ENST00000556081 394 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 MIR5195-201ENST00000583555 115 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 OR1M4P-201ENST00000589199 287 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AC008121.1-201ENST00000603244 268 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL355877.2-201ENST00000603670 358 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL355073.2-201ENST00000612106 557 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AC092794.2-201ENST00000620933 563 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 MIR3529-201ENST00000637713 78 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC3.59□□□□□ -1.83
PRPF3O43395 AC010889.1-201ENST00000566193 2666 ntBASIC3.59□□□□□ -1.83
PRPF3O43395 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.59□□□□□ -1.84
PRPF3O43395 OR8K3-203ENST00000641662 2438 ntAPPRIS P1 BASIC3.59□□□□□ -1.84
PRPF3O43395 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.58□□□□□ -1.84
PRPF3O43395 LRRC70-201ENST00000334994 2249 ntAPPRIS P1 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF3O43395 U3.6-201ENST00000363622 211 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 SNORA38.1-201ENST00000364172 131 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 RNU6-867P-201ENST00000364956 107 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 RNU1-100P-201ENST00000365255 165 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 RNU5E-7P-201ENST00000365290 117 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 CD24P4-201ENST00000382840 243 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 RNU6-19P-201ENST00000384718 107 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 UBE2Q2P12-201ENST00000414573 204 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AL359672.1-201ENST00000442302 409 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF3O43395 MTND5P20-201ENST00000448677 143 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AC012308.1-201ENST00000451232 178 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 RPS27P26-201ENST00000494583 239 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF3O43395 AC010265.1-201ENST00000513509 211 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF3O43395 AC010186.2-204ENST00000537668 439 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF3O43395 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.58□□□□□ -1.84
PRPF3O43395 VN1R107P-201ENST00000601784 209 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AL391813.1-201ENST00000603098 260 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 APOOP1-201ENST00000604695 592 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 AL359962.2-201ENST00000610044 303 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF3O43395 SNORA50A-202ENST00000629536 136 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC3.58□□□□□ -1.84
PRPF3O43395 AC110079.1-202ENST00000635213 138 ntBASIC3.58□□□□□ -1.84
PRPF3O43395 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.58□□□□□ -1.84
PRPF3O43395 OR9G4-203ENST00000641581 2603 ntAPPRIS P1 BASIC3.58□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 111.4 ms