Protein–RNA interactions for Protein: O14627

CDX4, Homeobox protein CDX-4, humanhuman

Predicted RBP Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX4O14627 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.32□□□□□ -2.04
CDX4O14627 AC117522.1-201ENST00000509821 380 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AC107222.1-201ENST00000510899 637 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AC087318.1-201ENST00000536786 389 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 MGST1-215ENST00000540056 546 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AL512360.1-201ENST00000555346 234 ntBASIC2.32□□□□□ -2.04
CDX4O14627 C18orf54-203ENST00000578138 776 ntTSL 3 BASIC2.32□□□□□ -2.04
CDX4O14627 AC098848.2-201ENST00000588023 330 ntBASIC2.32□□□□□ -2.04
CDX4O14627 RPL23AP78-201ENST00000599928 470 ntBASIC2.32□□□□□ -2.04
CDX4O14627 BNIP3P9-201ENST00000603714 553 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AL355598.1-201ENST00000604169 202 ntBASIC2.32□□□□□ -2.04
CDX4O14627 AL627309.6-201ENST00000606857 840 ntBASIC2.32□□□□□ -2.04
CDX4O14627 C8orf59-212ENST00000615697 483 ntAPPRIS P1 TSL 2 BASIC2.32□□□□□ -2.04
CDX4O14627 AC009161.2-201ENST00000624626 138 ntBASIC2.32□□□□□ -2.04
CDX4O14627 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC2.32□□□□□ -2.04
CDX4O14627 CR848007.1-201ENST00000442354 1699 ntBASIC2.31□□□□□ -2.04
CDX4O14627 MTND5P19-201ENST00000424872 1794 ntBASIC2.31□□□□□ -2.04
CDX4O14627 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.31□□□□□ -2.04
CDX4O14627 AL356292.1-201ENST00000283110 373 ntBASIC2.31□□□□□ -2.04
CDX4O14627 ZBTB8OS-201ENST00000341885 312 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
CDX4O14627 Y_RNA.4-201ENST00000362333 112 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RNU6-1159P-201ENST00000362933 107 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RNY4P14-201ENST00000363656 96 ntBASIC2.31□□□□□ -2.04
CDX4O14627 SNORD56.5-201ENST00000364281 72 ntBASIC2.31□□□□□ -2.04
CDX4O14627 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 RNU6-946P-201ENST00000383878 107 ntBASIC2.31□□□□□ -2.04
CDX4O14627 Y_RNA.390-201ENST00000383932 102 ntBASIC2.31□□□□□ -2.04
CDX4O14627 Y_RNA.402-201ENST00000383972 102 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RNA5SP210-201ENST00000391034 120 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL21P75-201ENST00000396599 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL21P28-201ENST00000401418 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AL592114.1-201ENST00000403842 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.31□□□□□ -2.04
CDX4O14627 MTCO1P20-201ENST00000425366 358 ntBASIC2.31□□□□□ -2.04
CDX4O14627 HMGB1P9-201ENST00000429856 646 ntBASIC2.31□□□□□ -2.04
CDX4O14627 Z98742.2-201ENST00000431564 187 ntBASIC2.31□□□□□ -2.04
CDX4O14627 GPR143P-201ENST00000434155 205 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC079781.2-201ENST00000446424 169 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 RPL23AP20-201ENST00000447965 421 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL12P25-201ENST00000455592 494 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL26P9-201ENST00000457466 433 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL21P39-201ENST00000463605 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 RPL21P93-201ENST00000480465 489 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC103975.1-201ENST00000482506 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC233702.1-201ENST00000482905 502 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC087190.1-201ENST00000484462 480 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC093591.1-201ENST00000491435 481 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC069439.1-201ENST00000494739 167 ntBASIC2.31□□□□□ -2.04
CDX4O14627 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX4O14627 RPL21P16-201ENST00000495531 483 ntBASIC2.31□□□□□ -2.04
CDX4O14627 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.31□□□□□ -2.04
CDX4O14627 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.31□□□□□ -2.04
CDX4O14627 Y_RNA.693-201ENST00000516641 110 ntBASIC2.31□□□□□ -2.04
CDX4O14627 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX4O14627 HSPE1P18-201ENST00000517602 280 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.31□□□□□ -2.04
CDX4O14627 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX4O14627 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 AC025678.1-201ENST00000567861 338 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC068135.2-201ENST00000569293 1028 ntBASIC2.31□□□□□ -2.04
CDX4O14627 SNORA59B-202ENST00000578183 701 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC004805.2-201ENST00000605382 482 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC2.31□□□□□ -2.04
CDX4O14627 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC2.31□□□□□ -2.04
CDX4O14627 MTND5P42-201ENST00000637720 498 ntBASIC2.31□□□□□ -2.04
CDX4O14627 MAPK10-266ENST00000641066 6555 ntBASIC2.31□□□□□ -2.04
CDX4O14627 AC004520.1-201ENST00000608362 1413 ntBASIC2.31□□□□□ -2.04
CDX4O14627 Y_RNA.22-201ENST00000362492 102 ntBASIC2.3□□□□□ -2.04
CDX4O14627 Y_RNA.164-201ENST00000363709 102 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-512P-201ENST00000364438 103 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-108P-201ENST00000365558 107 ntBASIC2.3□□□□□ -2.04
CDX4O14627 SMIM11P1-201ENST00000369586 178 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-641P-201ENST00000384006 107 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6-74P-201ENST00000384235 107 ntBASIC2.3□□□□□ -2.04
CDX4O14627 MIR301A-201ENST00000385261 86 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNA5SP354-201ENST00000391247 136 ntBASIC2.3□□□□□ -2.04
CDX4O14627 FO393413.1-201ENST00000402892 195 ntBASIC2.3□□□□□ -2.04
CDX4O14627 MIR1277-201ENST00000408536 78 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU6ATAC40P-201ENST00000408580 137 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RNU2-39P-201ENST00000410604 198 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPS12P24-201ENST00000412619 387 ntBASIC2.3□□□□□ -2.04
CDX4O14627 NDUFS5P4-201ENST00000412983 318 ntBASIC2.3□□□□□ -2.04
CDX4O14627 USP9YP6-201ENST00000413550 854 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 USP9YP27-201ENST00000418455 438 ntBASIC2.3□□□□□ -2.04
CDX4O14627 LINC01707-201ENST00000425517 627 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 AC093106.2-201ENST00000428212 385 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPL36AP53-201ENST00000432891 316 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AL591212.2-201ENST00000433923 257 ntBASIC2.3□□□□□ -2.04
CDX4O14627 RPL7P54-201ENST00000438336 674 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AL714022.1-201ENST00000439897 151 ntBASIC2.3□□□□□ -2.04
CDX4O14627 MTATP6P23-201ENST00000440153 476 ntBASIC2.3□□□□□ -2.04
CDX4O14627 AC018816.1-203ENST00000441894 338 ntTSL 3 BASIC2.3□□□□□ -2.04
CDX4O14627 AL353572.1-201ENST00000442490 417 ntBASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 80.1 ms