Protein–RNA interactions for Protein: Q9Y566

SHANK1, SH3 and multiple ankyrin repeat domains protein 1, humanhuman

Predictions only

Length 2,161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1Q9Y566 MTATP6P7-201ENST00000453315 681 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RNU6-420P-201ENST00000458780 107 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 HMGN2P13-201ENST00000476476 274 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 RPS29P20-201ENST00000489592 171 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 CBX3P3-201ENST00000508108 532 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC107393.1-201ENST00000512403 346 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 TRMT112P2-201ENST00000512910 132 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.672-201ENST00000516289 104 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 SNORD59.2-201ENST00000516873 68 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC060765.1-201ENST00000522776 544 ntTSL 4 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 DUXAP5-201ENST00000529668 529 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AP000907.2-201ENST00000530827 353 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 LINC01491-201ENST00000558434 505 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC006362.1-201ENST00000567392 174 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 LINC01735-201ENST00000568112 279 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MIR5089-201ENST00000580047 84 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MIR3609-201ENST00000582661 80 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC005771.1-201ENST00000585581 349 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 NBR2-204ENST00000587322 63 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AL360085.1-201ENST00000604713 532 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC064872.1-201ENST00000604823 1072 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC245008.1-201ENST00000608123 476 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC104010.1-201ENST00000616889 150 ntBASIC1.64□□□□□ -2.15
SHANK1Q9Y566 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC1.64□□□□□ -2.15
SHANK1Q9Y566 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 FSIP2-202ENST00000424728 20788 ntAPPRIS P2 TSL 5 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 RNU6-660P-201ENST00000364566 109 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.553-201ENST00000384670 102 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 MIR19A-201ENST00000384878 82 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 MIR1276-201ENST00000408707 83 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AP000275.1-201ENST00000411943 390 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 OR6C66P-201ENST00000414917 930 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 ELOCP4-201ENST00000420090 333 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC098831.1-201ENST00000440661 216 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 TH2LCRR-203ENST00000457489 439 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 RBM43P1-201ENST00000476891 1081 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC022447.1-201ENST00000515358 464 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 RNU5F-8P-201ENST00000515941 111 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 SNORA25.15-201ENST00000516487 89 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 RNU6-410P-201ENST00000517006 107 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC022634.1-201ENST00000520765 532 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC021242.2-203ENST00000521842 687 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 TRAV28-201ENST00000557548 323 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC024619.4-201ENST00000580924 316 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC069114.1-201ENST00000580927 287 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 TCF4-AS2-201ENST00000586467 445 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC012254.1-201ENST00000592747 200 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AL022154.1-201ENST00000604698 785 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC239868.4-201ENST00000608318 671 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC012360.2-201ENST00000609349 391 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 FTX_3.1-201ENST00000610451 147 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC138749.5-201ENST00000611461 208 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 DUSP12P1-201ENST00000612874 516 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC116165.2-201ENST00000616705 206 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AL136313.1-201ENST00000624804 202 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 MIR6863-201ENST00000636112 90 ntBASIC1.63□□□□□ -2.15
SHANK1Q9Y566 OR5M1-202ENST00000641076 4302 ntAPPRIS P1 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 TXLNGY-201ENST00000253320 7299 ntTSL 2 BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC1.63□□□□□ -2.15
SHANK1Q9Y566 AC110491.1-201ENST00000562191 2010 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 Y_RNA.51-201ENST00000362725 102 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MIR1323-201ENST00000408090 73 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RNU6-193P-201ENST00000410977 107 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 DPPA3P1-201ENST00000448050 469 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTND1P27-201ENST00000451117 902 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RGS5-217ENST00000451759 835 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTND1P12-201ENST00000455231 147 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RPS29P12-201ENST00000460178 152 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC116337.2-201ENST00000477662 156 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 RPS15AP36-201ENST00000492022 382 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC082650.1-201ENST00000503542 575 ntTSL 4 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC109927.2-201ENST00000506416 303 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTND5P13-201ENST00000513046 1079 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 MTCO3P28-201ENST00000513351 515 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC022360.2-202ENST00000517308 407 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC084851.1-201ENST00000529105 249 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 ROCK1P1-201ENST00000573767 549 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 LINC01899-202ENST00000583756 575 ntTSL 3 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 AC022079.1-201ENST00000621546 602 ntBASIC1.62□□□□□ -2.15
SHANK1Q9Y566 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
SHANK1Q9Y566 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC1.62□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 101.2 ms