Protein–RNA interactions for Protein: Q9Y4P1

ATG4B, Cysteine protease ATG4B, humanhuman

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4BQ9Y4P1 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 MIR548AC-201ENST00000585049 88 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC087045.1-201ENST00000605856 382 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC005332.10-201ENST00000612725 619 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC009509.4-201ENST00000619202 509 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 AC244517.12-201ENST00000623581 663 ntBASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
ATG4BQ9Y4P1 MIR412-201ENST00000362142 91 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 SNORD3E-201ENST00000362899 217 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1287P-201ENST00000362914 107 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-486P-201ENST00000363116 107 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP393-201ENST00000363423 117 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP456-201ENST00000364002 114 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1280P-201ENST00000365211 107 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 SNORD115-7-201ENST00000365306 82 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 SNORA75B-201ENST00000384053 137 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1060P-201ENST00000384664 107 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-1179P-201ENST00000384667 107 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 MIR147B-201ENST00000390185 80 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 ATP13A5-AS1-201ENST00000414634 476 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RPS15AP9-201ENST00000439856 381 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AL162395.1-201ENST00000457882 422 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC006512.1-201ENST00000468816 291 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC022493.1-201ENST00000492984 337 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RPL22P13-201ENST00000493291 347 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC116655.1-201ENST00000508324 901 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC112206.3-201ENST00000514578 389 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 RNA5SP112-201ENST00000515937 99 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 LINC02386-203ENST00000552182 501 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC024581.2-201ENST00000619986 252 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC138627.2-201ENST00000624202 601 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 AC243829.7-201ENST00000633081 225 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 MTND5P17-201ENST00000418405 1603 ntBASIC2.35□□□□□ -2.03
ATG4BQ9Y4P1 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 RNU4-82P-201ENST00000362443 140 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 MIR518C-201ENST00000384822 101 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 RNU6-220P-201ENST00000390919 107 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL162578.1-201ENST00000406202 378 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 SNORA11.2-201ENST00000408318 127 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 BTF3L4P1-201ENST00000413813 468 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL139397.1-201ENST00000430456 644 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 MTCO2P11-201ENST00000431069 680 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 FABP5P14-201ENST00000437273 393 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 TPT1P7-201ENST00000458300 517 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 RNU7-182P-201ENST00000459009 62 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AL121769.1-201ENST00000469473 401 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 RPS3AP17-201ENST00000472594 777 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC023141.11-201ENST00000508864 202 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 RNU5B-3P-201ENST00000516601 115 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC108471.2-204ENST00000526807 784 ntTSL 5 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AP002963.1-201ENST00000530590 184 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC025678.1-201ENST00000567861 338 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 MTND1P15-201ENST00000579262 949 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 MIR4765-201ENST00000585007 77 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC008536.2-201ENST00000607284 349 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC069294.1-201ENST00000608397 350 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 U6.42-201ENST00000618440 107 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 U4.3-201ENST00000621047 82 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 AC068631.1-221ENST00000626006 592 ntTSL 5 BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 IGHVIII-44-202ENST00000636235 289 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 Clostridiales-1.2-201ENST00000636724 160 ntBASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 TAB3-205ENST00000378933 6671 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
ATG4BQ9Y4P1 C1orf141-203ENST00000371007 2153 ntAPPRIS P3 TSL 5 BASIC2.34□□□□□ -2.04
ATG4BQ9Y4P1 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.34□□□□□ -2.04
ATG4BQ9Y4P1 ZNF271P-202ENST00000465539 1970 ntBASIC2.34□□□□□ -2.04
ATG4BQ9Y4P1 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC080100.1-201ENST00000624239 5356 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 RNU6-1119P-201ENST00000384349 108 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 MIR578-201ENST00000384828 96 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 MIR454-201ENST00000390180 115 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AC133106.1-201ENST00000419029 397 ntTSL 3 BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AL162254.1-202ENST00000419604 497 ntTSL 5 BASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 AL365338.1-201ENST00000422282 858 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 BX276092.3-201ENST00000424182 230 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 SUMO1P4-201ENST00000429430 302 ntBASIC2.33□□□□□ -2.04
ATG4BQ9Y4P1 MTCO3P5-201ENST00000433620 714 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 124.4 ms