Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TGIF1P1-201ENST00000558095 802 ntBASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 UBE2Q2P8-201ENST00000560644 102 ntBASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 MIR5685-201ENST00000579080 79 ntBASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 AL138686.1-201ENST00000612699 315 ntTSL 3 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 AC040896.1-201ENST00000613819 479 ntBASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 U4.7-201ENST00000638126 106 ntBASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 SOCS4-201ENST00000339298 6667 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 XRCC4-202ENST00000338635 1579 ntAPPRIS P4 TSL 2 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 DAZ4-201ENST00000382296 2048 ntAPPRIS P5 TSL 5 BASIC4.21□□□□□ -1.74
R3HCC1Q9Y3T6 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AGL-205ENST00000370163 7166 ntAPPRIS P1 TSL 1 (best) BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 IARS-201ENST00000375627 697 ntTSL 3 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC106873.1-201ENST00000420664 459 ntTSL 3 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC243428.1-201ENST00000421099 264 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 RPS15AP10-201ENST00000432472 382 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 BX679664.1-201ENST00000434429 253 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC006539.3-201ENST00000454258 129 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 IGKV2D-30-201ENST00000474213 395 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 RPL30P14-201ENST00000482744 348 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC109479.2-201ENST00000517842 174 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC024220.1-201ENST00000603675 484 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 STARD13-AS-221ENST00000608197 604 ntTSL 5 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC011890.2-201ENST00000613393 294 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AF117829.1-206ENST00000621883 3802 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AL354798.1-201ENST00000622505 329 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC073308.1-201ENST00000623696 305 ntBASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 TRMT10A-203ENST00000394877 3516 ntAPPRIS P1 TSL 2 BASIC4.2□□□□□ -1.74
R3HCC1Q9Y3T6 RXFP1-205ENST00000448688 3861 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 CUL4B-202ENST00000371322 4902 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AL161668.1-201ENST00000320322 358 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-942P-201ENST00000363002 107 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 Y_RNA.112-201ENST00000363250 102 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RNA5SP515-201ENST00000364570 118 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 SNORA22B-201ENST00000383876 138 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-213P-201ENST00000384051 104 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AL513475.1-201ENST00000406602 315 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-174P-201ENST00000410406 106 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 NDUFS5P4-201ENST00000412983 318 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 DAP3P1-201ENST00000441522 278 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 SSXP4-201ENST00000451349 245 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 BTF3P15-201ENST00000455606 336 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RPL26P9-201ENST00000457466 433 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AK3P2-201ENST00000507976 429 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AC026402.1-201ENST00000513642 170 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-377P-201ENST00000515965 102 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AC022634.1-201ENST00000520765 532 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AC091043.1-201ENST00000579830 453 ntTSL 3 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AL451007.1-201ENST00000595491 289 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 PART1_1.1-201ENST00000611761 217 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 MIR6134-201ENST00000617606 109 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 SCARNA4-202ENST00000625402 129 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 AL158835.3-201ENST00000625908 565 ntTSL 5 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 PWAR6-201ENST00000552334 4618 ntBASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 DEUP1-202ENST00000525646 1920 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 GLCE-202ENST00000559420 4840 ntTSL 1 (best) BASIC4.19□□□□□ -1.74
R3HCC1Q9Y3T6 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 LRMP-221ENST00000636465 4540 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 MIR30E-201ENST00000362104 92 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-336P-201ENST00000364891 107 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 U8.8-201ENST00000365399 135 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 SNORD6-201ENST00000365444 73 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 Y_RNA.463-201ENST00000384271 102 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-1106P-201ENST00000390845 107 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AP003170.3-201ENST00000399123 158 ntTSL 5 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AC023051.1-201ENST00000414098 876 ntTSL 5 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AL139247.1-201ENST00000422768 325 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 BX276092.3-201ENST00000424182 230 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 HMGN2P7-201ENST00000456186 273 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 HMGN2P13-201ENST00000476476 274 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 RNU6-470P-201ENST00000515954 104 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AC005476.1-201ENST00000554427 397 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AP005271.1-201ENST00000582470 412 ntTSL 3 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 HMGN2P15-201ENST00000585707 270 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 LUZP6-201ENST00000589735 177 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AC020895.1-201ENST00000595362 272 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 SRGNP1-201ENST00000603392 451 ntBASIC4.18□□□□□ -1.74
R3HCC1Q9Y3T6 AC005046.1-201ENST00000608515 625 ntBASIC4.18□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 149.8 ms