Protein–RNA interactions for Protein: Q9NTJ3

SMC4, Structural maintenance of chromosomes protein 4, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4Q9NTJ3 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 MICF-203ENST00000432679 129 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC023194.1-201ENST00000493084 308 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 LINC01326-201ENST00000495159 755 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 RBBP4P6-201ENST00000508098 202 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.655-201ENST00000515919 96 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 VTRNA2-2P-201ENST00000516091 103 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 COX6CP5-201ENST00000527162 228 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC027176.1-201ENST00000560204 514 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC009558.1-201ENST00000561174 581 ntTSL 4 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 NRBF2P5-201ENST00000603087 788 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AL138889.2-201ENST00000603883 242 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC007621.1-201ENST00000604544 437 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC087045.1-201ENST00000605856 382 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 uc_338.14-201ENST00000613162 166 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 uc_338.11-201ENST00000619132 160 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC139792.2-201ENST00000624218 587 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC009161.2-201ENST00000624626 138 ntBASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SMC4Q9NTJ3 AC069528.2-201ENST00000624849 1991 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 U3.12-201ENST00000364498 214 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RNU6-1180P-201ENST00000364935 107 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 DEFA7P-201ENST00000382676 285 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RNU6-259P-201ENST00000383999 107 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RNU6-456P-201ENST00000384493 107 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RNU6-748P-201ENST00000384648 107 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RNU6-19P-201ENST00000384718 107 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.576-201ENST00000384781 102 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC068050.1-201ENST00000394891 380 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 EEF1A1P40-201ENST00000412883 573 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC092427.1-202ENST00000430569 476 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RPS12P2-201ENST00000439728 269 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 BTF3P15-201ENST00000455606 336 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 RPS27P27-201ENST00000498779 255 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 GZMAP1-201ENST00000503054 631 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 TRIQK-207ENST00000519069 598 ntTSL 4 BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 FAM92A1P1-201ENST00000528023 890 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 OR5BN1P-201ENST00000532955 829 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 MIR4672-201ENST00000583126 81 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AL391646.1-201ENST00000603860 190 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 AC025449.1-201ENST00000603896 529 ntBASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC3.14□□□□□ -1.91
SMC4Q9NTJ3 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 ANKRD36BP1-202ENST00000604892 1417 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RNU6-623P-201ENST00000363143 105 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.381-201ENST00000365666 102 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RNU1-138P-201ENST00000384093 164 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RNU2-25P-201ENST00000411041 191 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 Y_RNA.623-201ENST00000411128 95 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC104389.3-201ENST00000445629 235 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC104058.1-201ENST00000448028 297 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC092001.1-201ENST00000453012 261 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC233279.1-201ENST00000455300 423 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RNU7-182P-201ENST00000459009 62 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AP000852.1-201ENST00000472460 573 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RPS3AP17-201ENST00000472594 777 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC008716.1-201ENST00000511084 513 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC112206.3-201ENST00000514578 389 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 RN7SKP40-201ENST00000517211 242 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 SUB1P2-201ENST00000556401 297 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 MIR4446-201ENST00000578505 67 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 AL049779.4-201ENST00000604500 156 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 SEPT14P19-203ENST00000633205 211 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 MTND5P30-201ENST00000452896 1731 ntBASIC3.13□□□□□ -1.91
SMC4Q9NTJ3 OXR1-215ENST00000531443 3599 ntTSL 5 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 SNORA25.6-201ENST00000364121 118 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RNU4-48P-201ENST00000365559 182 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RNU6-898P-201ENST00000365627 104 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL359511.1-201ENST00000402970 211 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 GSTA9P-201ENST00000406231 611 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 RNU2-9P-201ENST00000410194 145 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL353193.1-201ENST00000421444 268 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL627311.1-201ENST00000431514 115 ntBASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 LINC00844-201ENST00000432535 477 ntTSL 2 BASIC3.12□□□□□ -1.91
SMC4Q9NTJ3 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC3.12□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 114.1 ms