Protein–RNA interactions for Protein: Q9NSE2

CISH, Cytokine-inducible SH2-containing protein, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CISHQ9NSE2 MTCO3P46-201ENST00000425787 232 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 SDAD1P3-201ENST00000427380 333 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC009158.1-207ENST00000432973 394 ntTSL 5 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AL357134.1-201ENST00000445848 426 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC245102.2-201ENST00000448956 180 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 HMGN2P18-201ENST00000450680 270 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 RNU4ATAC11P-201ENST00000515939 126 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 RN7SKP179-201ENST00000516126 217 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 RNU6-678P-201ENST00000516832 109 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AP004247.1-201ENST00000531556 1289 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AL445074.1-201ENST00000555362 318 ntTSL 2 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC104072.1-201ENST00000568817 668 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 MIR4782-201ENST00000577987 79 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC015813.2-201ENST00000578794 711 ntAPPRIS P1 TSL 3 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC005154.1-222ENST00000579024 341 ntTSL 5 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC060771.1-201ENST00000582031 164 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 NDUFA8P1-201ENST00000605525 367 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC090186.1-201ENST00000605991 572 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AC096772.1-201ENST00000609146 564 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 OR8H2-202ENST00000618136 1038 ntAPPRIS ALT1 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 U1.36-201ENST00000620684 176 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 AP000676.3-201ENST00000623299 569 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 SATB1-AS1-243ENST00000627546 589 ntTSL 5 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AL391597.2-201ENST00000635698 479 ntTSL 5 BASIC1.2□□□□□ -2.22
CISHQ9NSE2 AL161722.3-201ENST00000605789 2983 ntBASIC1.2□□□□□ -2.22
CISHQ9NSE2 LRRIQ1-202ENST00000393217 5394 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
CISHQ9NSE2 snoZ40.1-201ENST00000364540 72 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 TRAJ50-201ENST00000390487 60 ntAPPRIS P1 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 RPS15AP12-201ENST00000419498 388 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 ZNF736P7Y-201ENST00000425158 820 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 AL050338.2-202ENST00000431609 956 ntTSL 2 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC007879.4-201ENST00000440545 361 ntTSL 3 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 LRRC70-203ENST00000491184 703 ntTSL 3 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 RNU6-667P-201ENST00000517186 102 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 CYCSP27-201ENST00000527643 293 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 CARD18-203ENST00000532895 422 ntTSL 2 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC005832.3-201ENST00000537929 631 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 AL160236.1-201ENST00000556317 195 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC009093.3-203ENST00000565800 121 ntTSL 2 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 AP001496.1-201ENST00000579113 471 ntTSL 4 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 AC091304.6-201ENST00000619761 202 ntBASIC1.19□□□□□ -2.22
CISHQ9NSE2 RMDN2-203ENST00000402091 1973 ntTSL 2 BASIC1.19□□□□□ -2.22
CISHQ9NSE2 SNORD115-3-201ENST00000363100 82 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 RNU6-392P-201ENST00000364926 101 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 Y_RNA.408-201ENST00000383987 102 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 TRAJ23-201ENST00000390514 63 ntAPPRIS P1 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 MRPL30-202ENST00000409145 562 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 RNU6-321P-201ENST00000410912 106 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 OR6C66P-201ENST00000414917 930 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AL953862.1-201ENST00000423016 168 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 LINC01077-201ENST00000452288 413 ntTSL 3 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AL356272.1-201ENST00000454538 832 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 LINC01198-202ENST00000458282 558 ntTSL 5 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 RNU7-59P-201ENST00000459101 61 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC078980.1-201ENST00000485384 262 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC005840.1-201ENST00000498412 377 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 RNY4P37-201ENST00000516225 96 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 RNU6-586P-201ENST00000517265 104 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC008083.1-201ENST00000547748 663 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC026474.1-201ENST00000562422 428 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC005909.1-201ENST00000577835 755 ntTSL 3 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC099785.1-201ENST00000605697 437 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 AC107952.2-201ENST00000606048 486 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 AL050343.2-201ENST00000607338 280 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 PCMTD1P7-201ENST00000634506 357 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 KIAA1551-201ENST00000312561 6230 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CISHQ9NSE2 CYSLTR1-203ENST00000614798 2681 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
CISHQ9NSE2 ZNF680P1-201ENST00000436625 1469 ntBASIC1.18□□□□□ -2.22
CISHQ9NSE2 FKTN-204ENST00000448551 1700 ntTSL 2 BASIC1.18□□□□□ -2.22
CISHQ9NSE2 DLEU2_6.3-201ENST00000340052 136 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 RNU6-611P-201ENST00000384276 104 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 RNU6-14P-201ENST00000384630 106 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC1.17□□□□□ -2.22
CISHQ9NSE2 RPL30P13-201ENST00000418873 348 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 USP9YP21-201ENST00000420603 432 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 SLC44A3-AS1-205ENST00000424505 612 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC005094.1-201ENST00000440420 368 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC118469.1-201ENST00000442943 488 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 RPF2P2-201ENST00000504693 896 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 MTCYBP43-201ENST00000513621 740 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 RNU6-1028P-201ENST00000517164 93 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC136619.2-201ENST00000563361 631 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AL132657.2-201ENST00000564417 358 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC026771.1-201ENST00000564672 415 ntTSL 2 BASIC1.17□□□□□ -2.22
CISHQ9NSE2 AL512347.1-201ENST00000566420 503 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 AC126365.2-201ENST00000580630 379 ntBASIC1.17□□□□□ -2.22
CISHQ9NSE2 RPL30P11-203ENST00000598995 310 ntBASIC1.17□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 268.4 ms