Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 AC098826.1-201ENST00000433943 471 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL022238.1-201ENST00000442557 355 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 IFNA11P-201ENST00000446352 526 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 LINC01813-201ENST00000451034 712 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC092001.1-201ENST00000453012 261 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AL033528.1-201ENST00000453780 140 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 RPL23AP49-201ENST00000492925 468 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC092436.1-201ENST00000506450 503 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 Y_RNA.695-201ENST00000516715 107 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC007598.1-202ENST00000561528 435 ntTSL 3 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC080013.6-201ENST00000606185 215 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 MIR6840-201ENST00000611937 71 ntBASIC2.42□□□□□ -2.02
HPS4Q9NQG7 AC068631.1-220ENST00000630726 256 ntTSL 5 BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC2.42□□□□□ -2.02
HPS4Q9NQG7 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 CDC27P3-201ENST00000635418 1910 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNU6-169P-201ENST00000365336 107 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNU6-898P-201ENST00000365627 104 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNU6-641P-201ENST00000384006 107 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNY3P10-201ENST00000384764 102 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AP000473.1-201ENST00000413645 550 ntTSL 3 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 LINC01817-201ENST00000429317 564 ntTSL 4 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 GHRL-208ENST00000439975 326 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC096638.1-201ENST00000444678 216 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 GAPDHP17-201ENST00000449858 1001 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AL133481.3-201ENST00000456546 333 ntTSL 3 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RPL31P3-201ENST00000458430 332 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNA5SP269-201ENST00000459032 137 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 snoU109.1-201ENST00000459339 135 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC117522.1-201ENST00000509821 380 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC108078.2-201ENST00000510750 236 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 RNU6-237P-201ENST00000515985 71 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 Vault.3-201ENST00000516676 95 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 MIR3682-201ENST00000581338 84 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 NRBF2P1-201ENST00000587407 859 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC119751.7-201ENST00000600494 245 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC245008.1-201ENST00000608123 476 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC024940.5-201ENST00000622889 474 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 ANKRD36BP1-202ENST00000604892 1417 ntBASIC2.41□□□□□ -2.02
HPS4Q9NQG7 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC2.41□□□□□ -2.02
HPS4Q9NQG7 AC103710.2-202ENST00000641454 2853 ntBASIC2.4□□□□□ -2.02
HPS4Q9NQG7 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 FGF7P2-201ENST00000332473 296 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 Y_RNA.77-201ENST00000362962 107 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU1-91P-201ENST00000364746 163 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-1280P-201ENST00000365211 107 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-395P-201ENST00000365662 106 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 SNORA75B-201ENST00000384053 137 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-166P-201ENST00000384371 107 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 SNORA24.1-201ENST00000384401 135 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 SNORA41-201ENST00000384675 132 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AL079342.1-201ENST00000401460 267 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 MIR1289-2-201ENST00000408360 111 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-195P-201ENST00000411352 109 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 TOMM20P4-201ENST00000427861 435 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC009961.2-201ENST00000435771 251 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AL078601.1-201ENST00000444542 271 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AL360221.1-201ENST00000445989 335 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC116666.1-201ENST00000453915 551 ntTSL 5 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 SNORD42A-201ENST00000459584 64 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 FAM92A1P2-202ENST00000504766 877 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC116655.1-201ENST00000508324 901 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-123P-201ENST00000516163 102 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 ADI1P3-201ENST00000549509 470 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 MIR4524B-201ENST00000581569 115 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RSL24D1P11-201ENST00000591045 491 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC008121.1-201ENST00000603244 268 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC126118.1-201ENST00000607744 628 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC067747.1-201ENST00000608026 250 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC005332.10-201ENST00000612725 619 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC012409.4-201ENST00000612923 249 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 uc_338.14-201ENST00000613162 166 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AP001506.1-201ENST00000615444 211 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 AC110994.2-201ENST00000635481 492 ntBASIC2.4□□□□□ -2.03
HPS4Q9NQG7 THOC2-216ENST00000491737 4452 ntTSL 5 BASIC2.4□□□□□ -2.03
HPS4Q9NQG7 RNU6-297P-201ENST00000384636 107 ntBASIC2.39□□□□□ -2.03
HPS4Q9NQG7 MIR518D-201ENST00000385014 87 ntBASIC2.39□□□□□ -2.03
HPS4Q9NQG7 AL445989.1-202ENST00000418943 776 ntTSL 2 BASIC2.39□□□□□ -2.03
HPS4Q9NQG7 AC003685.2-201ENST00000422795 395 ntBASIC2.39□□□□□ -2.03
HPS4Q9NQG7 ISCA1P6-201ENST00000427740 390 ntBASIC2.39□□□□□ -2.03
HPS4Q9NQG7 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.39□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 86.1 ms