Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.73□□□□□ -1.97
SIX2Q9NPC8 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.73□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.279-201ENST00000364763 95 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RNU6-867P-201ENST00000364956 107 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RNU6-715P-201ENST00000365204 103 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.615-201ENST00000410769 117 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RPL21P111-201ENST00000418453 477 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AL451060.1-203ENST00000431307 362 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 GPM6BP2-201ENST00000432046 144 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AL138900.2-201ENST00000434098 156 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AP000936.1-201ENST00000442124 483 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 GPM6BP1-201ENST00000446387 144 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RPS15AP34-201ENST00000487776 387 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC006445.2-201ENST00000510061 472 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC096725.1-201ENST00000514266 313 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 Y_RNA.665-201ENST00000516177 98 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RNU6-1282P-201ENST00000516735 96 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 RNU6-143P-201ENST00000516942 93 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AP003122.3-201ENST00000526316 255 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC084851.1-201ENST00000529105 249 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC023050.3-201ENST00000541142 333 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC004486.1-201ENST00000546846 233 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 LINC02164-201ENST00000566684 272 ntTSL 3 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC011933.3-201ENST00000578226 372 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 MIR3670-2-201ENST00000582974 65 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 MIR3670-1-201ENST00000584160 65 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 MIR3670-3-201ENST00000584855 65 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 MIR3670-4-201ENST00000612260 65 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC027309.3-201ENST00000623419 351 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC006386.2-201ENST00000624491 75 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AC012005.1-201ENST00000624575 75 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AP003400.5-201ENST00000624827 617 ntBASIC2.72□□□□□ -1.97
SIX2Q9NPC8 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC2.72□□□□□ -1.97
SIX2Q9NPC8 AL359693.1-201ENST00000614959 2407 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC062016.1-201ENST00000355719 319 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.72-201ENST00000362894 103 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.378-201ENST00000365652 113 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 MDM4-202ENST00000367180 547 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 MIR301A-201ENST00000385261 86 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 SNORA16.2-201ENST00000390991 127 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 SNORD70.1-201ENST00000391007 85 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AL162578.1-201ENST00000406202 378 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AL031121.1-201ENST00000406553 254 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 RNU4-26P-201ENST00000410270 107 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 ARL5AP1-201ENST00000418991 388 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 TMEM167AP1-201ENST00000423409 219 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 CECR9-201ENST00000453421 199 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 RNA5SP310-201ENST00000459084 116 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 RNU6-1208P-201ENST00000459588 107 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AP000852.1-201ENST00000472460 573 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 RPL21P93-201ENST00000480465 489 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.654-201ENST00000497848 106 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC110767.1-201ENST00000508374 239 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 LRRC34P2-201ENST00000514850 553 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 RNU6-1038P-201ENST00000516516 104 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 GNG2-205ENST00000554736 569 ntAPPRIS P1 TSL 4 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AL157871.3-201ENST00000557231 293 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC005730.3-201ENST00000583067 366 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC010620.2-201ENST00000600135 313 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AL356575.1-201ENST00000603008 283 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC092807.2-201ENST00000609367 243 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 AC100810.6-201ENST00000638068 285 ntBASIC2.71□□□□□ -1.98
SIX2Q9NPC8 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 TMPRSS11A-201ENST00000334830 3054 ntAPPRIS P3 TSL 2 BASIC2.71□□□□□ -1.98
SIX2Q9NPC8 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC091152.2-201ENST00000591628 2569 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 Y_RNA.167-201ENST00000363735 109 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU6-82P-201ENST00000363970 107 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNA5SP456-201ENST00000364002 114 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU6-371P-201ENST00000364283 108 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 U3.12-201ENST00000364498 214 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 DEFA7P-201ENST00000382676 285 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU6-217P-201ENST00000384164 104 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU6-393P-201ENST00000384475 107 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AP000567.1-201ENST00000406413 156 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 SNORA11.1-201ENST00000408133 129 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 RNU6-1148P-201ENST00000410992 104 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC096664.2-201ENST00000411843 406 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 LINC01853-201ENST00000417715 444 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 ARL5AP4-201ENST00000430731 512 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AF274573.2-201ENST00000437772 520 ntTSL 5 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 MTND5P20-201ENST00000448677 143 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AL590639.1-201ENST00000456484 337 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC096576.1-201ENST00000489014 359 ntBASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC105389.2-201ENST00000506475 435 ntTSL 3 BASIC2.7□□□□□ -1.98
SIX2Q9NPC8 AC098799.2-201ENST00000509466 868 ntBASIC2.7□□□□□ -1.98
Retrieved 100 of 98,524 protein–RNA pairs in 115.3 ms