Protein–RNA interactions for Protein: Q9C0J9

BHLHE41, Class E basic helix-loop-helix protein 41, humanhuman

Predicted RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BHLHE41Q9C0J9 MCMDC2-207ENST00000492775 1831 ntTSL 1 (best) BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 CPHL1P-201ENST00000461341 3407 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 PPP1R9A-202ENST00000340694 9689 ntAPPRIS P1 TSL 5 BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
BHLHE41Q9C0J9 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 SLC38A9-223ENST00000515629 2673 ntTSL 2 BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RNU5B-2P-201ENST00000363036 113 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RNU1-100P-201ENST00000365255 165 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-47P-201ENST00000383866 107 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RNU6-20P-201ENST00000384106 107 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 MIR192-201ENST00000384915 110 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 HLFP1-201ENST00000402375 499 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 MTATP6P29-201ENST00000415057 132 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AL606753.1-201ENST00000427435 87 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC110995.1-201ENST00000444185 628 ntTSL 3 BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC012308.1-201ENST00000451232 178 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RPL23AP81-201ENST00000455252 467 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RPL26P26-201ENST00000480251 434 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC016632.1-201ENST00000503994 196 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC097462.2-201ENST00000504623 481 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC074198.2-201ENST00000508153 258 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RN7SKP122-201ENST00000515923 296 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 Y_RNA.662-201ENST00000516028 97 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC022559.1-201ENST00000520905 205 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC091042.1-201ENST00000579213 173 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 AC006001.4-201ENST00000622243 395 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 MIR6810-201ENST00000622701 70 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 SNORA43.4-201ENST00000629559 138 ntBASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 ZBBX-202ENST00000392764 2849 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 PLS3-209ENST00000539310 3037 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
BHLHE41Q9C0J9 RIMS1-204ENST00000401910 3542 ntTSL 2 BASIC4.28□□□□□ -1.73
BHLHE41Q9C0J9 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 EIF2S1-202ENST00000466499 2390 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 PPP2R5A-205ENST00000537030 1719 ntTSL 2 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC135776.4-201ENST00000624300 1904 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC022336.2-201ENST00000568966 2538 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 ZNF560-201ENST00000301480 2654 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 KATNAL1-201ENST00000380615 7551 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC021146.4-201ENST00000309229 279 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AL590240.1-201ENST00000334118 313 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-50P-201ENST00000362356 103 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNA5SP307-201ENST00000362863 116 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-1159P-201ENST00000362933 107 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-137P-201ENST00000363680 108 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-884P-201ENST00000363889 107 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-281P-201ENST00000384212 103 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 U8.10-201ENST00000384260 133 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 Y_RNA.570-201ENST00000384750 101 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 MIR544A-201ENST00000384855 91 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 MIR607-201ENST00000385241 96 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 SNORA46.1-201ENST00000391069 153 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RNU6-159P-201ENST00000391080 106 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RN7SKP167-201ENST00000411047 285 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RPL19P1-201ENST00000411635 428 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RPS20P14-201ENST00000412545 360 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC074117.2-201ENST00000417130 397 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 POLR2KP2-201ENST00000438155 177 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC091959.1-201ENST00000495857 238 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RPL7P47-201ENST00000497299 556 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 LINC02230-201ENST00000511174 301 ntTSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AP003128.1-201ENST00000531414 448 ntTSL 2 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC084365.1-201ENST00000552470 310 ntTSL 3 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 HSPE1P5-201ENST00000561489 272 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC245748.3-201ENST00000588710 241 ntTSL 3 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC008749.1-201ENST00000597650 306 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 MIR6134-201ENST00000617606 109 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 Metazoa_SRP.193-201ENST00000622007 277 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 FAM35BP-202ENST00000497389 3337 ntBASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
BHLHE41Q9C0J9 AC024940.1-206ENST00000632817 4299 ntAPPRIS P5 TSL 5 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 PNISR-201ENST00000369239 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AL592182.3-201ENST00000642132 3304 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 AC015813.6-201ENST00000624409 5808 ntBASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
BHLHE41Q9C0J9 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC4.26□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 209 ms