Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 MIR3921-201ENST00000577308 85 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC012433.1-201ENST00000588916 398 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC098479.1-201ENST00000609225 154 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC009318.2-201ENST00000610917 651 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 AC112484.5-201ENST00000624189 228 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 FAM35DP-201ENST00000323387 2712 ntBASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 ZNF479-201ENST00000319636 1811 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
FOXP3Q9BZS1 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC018462.1-201ENST00000425966 1684 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 RNU6-212P-201ENST00000362642 104 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 SNORD50.1-201ENST00000362987 71 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 MIR124-3-201ENST00000384866 87 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 RNU6-121P-201ENST00000410525 99 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP494-201ENST00000410653 129 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC069079.1-201ENST00000419889 400 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AL590135.1-201ENST00000422215 156 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AL117339.2-201ENST00000430475 180 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AL627311.1-201ENST00000431514 115 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC013470.1-201ENST00000453438 462 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AL160314.1-201ENST00000490836 438 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 HMGB3P17-201ENST00000504195 649 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC008243.1-201ENST00000504955 389 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC109479.2-201ENST00000517842 174 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 ATP5F1P5-201ENST00000526403 760 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 PCED1B-AS1-208ENST00000551898 359 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 RN7SL600P-201ENST00000581811 299 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 MIR6867-201ENST00000610636 67 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 AC243829.7-201ENST00000633081 225 ntBASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 ANGPTL1-202ENST00000367629 2289 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.17□□□□□ -1.74
FOXP3Q9BZS1 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 KIAA1107-203ENST00000637221 4337 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 Y_RNA.20-201ENST00000362479 113 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 RNU6-200P-201ENST00000364743 107 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 PPIAP31-201ENST00000405422 495 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 RPL21P38-201ENST00000418090 167 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 NDUFB4P7-201ENST00000423198 363 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 COX6B1P7-201ENST00000430845 235 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC090617.2-201ENST00000433167 404 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL500522.2-201ENST00000448562 343 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC079354.2-201ENST00000453523 154 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL132838.2-201ENST00000492041 314 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC074250.1-201ENST00000511117 192 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 RNU6-138P-201ENST00000515952 107 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 SNORA70.14-201ENST00000516205 110 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 RNA5SP143-201ENST00000516936 115 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 RNU6-111P-201ENST00000517179 105 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC023632.4-201ENST00000517783 191 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 LINC02095-202ENST00000543512 323 ntTSL 3 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC103996.1-201ENST00000555468 102 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC022655.2-201ENST00000577280 318 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL355877.2-201ENST00000603670 358 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL645944.1-201ENST00000603857 493 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC006077.1-201ENST00000604746 343 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC110741.2-201ENST00000605278 268 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AL161629.2-201ENST00000615347 275 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AC244205.2-202ENST00000635781 342 ntBASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 AP003481.1-201ENST00000637808 351 ntTSL 5 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 BCLAF1-213ENST00000530767 4186 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 HSPA4L-202ENST00000505726 2639 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
FOXP3Q9BZS1 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.15□□□□□ -1.74
FOXP3Q9BZS1 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC4.15□□□□□ -1.74
FOXP3Q9BZS1 AKAP6-201ENST00000280979 15006 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXP3Q9BZS1 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXP3Q9BZS1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
FOXP3Q9BZS1 SNORA60-201ENST00000362396 134 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.27-201ENST00000362540 103 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 Y_RNA.245-201ENST00000364493 95 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 RNU6-708P-201ENST00000384217 107 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 HMGN2P8-201ENST00000391458 268 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 MTCYBP2-201ENST00000407745 171 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL356095.1-201ENST00000417217 199 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC010745.2-201ENST00000420404 839 ntTSL 3 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AC006011.1-201ENST00000442758 349 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL162151.2-201ENST00000448875 158 ntBASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 AL603839.1-201ENST00000453437 432 ntTSL 2 BASIC4.15□□□□□ -1.75
FOXP3Q9BZS1 ANP32BP2-201ENST00000454525 545 ntBASIC4.15□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 130.2 ms