Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 snoU13.30-201ENST00000458951 104 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AC092919.1-201ENST00000467896 229 ntTSL 2 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AL049874.1-201ENST00000489560 388 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RN7SL691P-201ENST00000494487 301 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 RNA5SP519-201ENST00000516480 119 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 MIR2116-201ENST00000517221 80 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 HMGB1P14-201ENST00000557424 591 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 BRDTP1-201ENST00000605735 677 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AC005046.1-201ENST00000608515 625 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 MIR663AHG-231ENST00000609044 590 ntTSL 5 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AL138721.1-201ENST00000616756 179 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 MIR8059-201ENST00000620427 81 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AL360181.4-201ENST00000621752 134 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 LINC01002-227ENST00000633363 541 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 SUPT16HP1-201ENST00000537175 3133 ntBASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 SLC44A5-202ENST00000370859 3896 ntAPPRIS ALT2 TSL 2 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.55□□□□□ -1.84
SSBP3Q9BWW4 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.8-201ENST00000362353 102 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RNA5SP502-201ENST00000362694 119 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.233-201ENST00000364407 101 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.569-201ENST00000384749 103 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RNU6ATAC15P-201ENST00000408279 121 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RN7SKP51-201ENST00000410781 304 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RN7SKP167-201ENST00000411047 285 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RNU2-61P-201ENST00000411069 191 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AL691426.1-201ENST00000416507 509 ntTSL 2 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AL358453.1-201ENST00000422522 250 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AC004975.1-201ENST00000428733 208 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 COX6B1P7-201ENST00000430845 235 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AL354824.2-201ENST00000458004 446 ntTSL 3 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 PPBPP1-201ENST00000510807 373 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 SNORD116-28-201ENST00000516123 91 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 RNA5SP73-201ENST00000516744 108 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AL133166.1-202ENST00000550975 565 ntTSL 4 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AC027288.2-201ENST00000553028 243 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 MIR3144-201ENST00000579460 79 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AC060766.3-201ENST00000591442 263 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AC015813.4-201ENST00000610469 179 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 AL353748.2-201ENST00000622148 471 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 Z82217.1-201ENST00000625157 8149 ntBASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 DNAH8-202ENST00000359357 13864 ntAPPRIS ALT2 TSL 2 BASIC3.54□□□□□ -1.84
SSBP3Q9BWW4 OR4G2P-202ENST00000641004 1759 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 GPAM-201ENST00000348367 6371 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 MRPL42-206ENST00000549982 15582 ntAPPRIS P2 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 MUC7-203ENST00000456088 2479 ntAPPRIS P2 TSL 4 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 PIGN-229ENST00000638936 4233 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 ZNF826P-207ENST00000622273 1910 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 SNORA25.1-201ENST00000362326 128 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-173P-201ENST00000364215 104 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 Y_RNA.240-201ENST00000364469 95 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-1027P-201ENST00000383998 107 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-926P-201ENST00000384075 107 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-514P-201ENST00000384208 107 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-804P-201ENST00000384286 107 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU6-21P-201ENST00000384710 107 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 MIR153-1-201ENST00000384914 90 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 TRAJ6-201ENST00000390531 62 ntAPPRIS P1 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RNU5A-5P-201ENST00000411054 116 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 LINC01701-201ENST00000419614 451 ntTSL 2 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC004837.2-201ENST00000435766 731 ntTSL 3 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC124916.1-201ENST00000444020 547 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC016700.2-201ENST00000446011 156 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC098851.1-201ENST00000476561 570 ntTSL 4 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 RPS29P19-201ENST00000479709 171 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC063944.1-201ENST00000496943 295 ntTSL 3 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 AL590240.4-201ENST00000616908 390 ntBASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 UGT2B7-201ENST00000305231 1887 ntAPPRIS P1 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 VEZT-201ENST00000261219 3435 ntTSL 5 BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC3.53□□□□□ -1.84
SSBP3Q9BWW4 DNAH6-201ENST00000237449 12666 ntAPPRIS P1 TSL 5 BASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 AC233981.2-201ENST00000611524 1614 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.245-201ENST00000364493 95 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 RNU5E-7P-201ENST00000365290 117 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 Y_RNA.383-201ENST00000383855 97 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 MIR514A1-201ENST00000385133 98 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 MIR1179-201ENST00000408703 91 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 RNU6-394P-201ENST00000410735 107 ntBASIC3.52□□□□□ -1.85
SSBP3Q9BWW4 TRAPPC2P9-201ENST00000434556 343 ntBASIC3.52□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 93.7 ms