Protein–RNA interactions for Protein: Q99909

SSX3, Protein SSX3, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3Q99909 AC011890.2-201ENST00000613393 294 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC009090.3-201ENST00000616553 565 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC048344.4-201ENST00000619744 527 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AC136475.10-201ENST00000620253 385 ntBASIC2.38□□□□□ -2.03
SSX3Q99909 AL353651.2-201ENST00000635706 559 ntTSL 5 BASIC2.38□□□□□ -2.03
SSX3Q99909 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC2.38□□□□□ -2.03
SSX3Q99909 MGST1-207ENST00000535309 1331 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSX3Q99909 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC2.37□□□□□ -2.03
SSX3Q99909 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 AC073325.2-201ENST00000339545 159 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 RNU6-1120P-201ENST00000362988 108 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 RNU6-486P-201ENST00000363116 107 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 Y_RNA.111-201ENST00000363248 100 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 GSTA9P-201ENST00000406231 611 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 U3.37-201ENST00000408528 213 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AL592148.1-201ENST00000413568 445 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX3Q99909 Z82209.1-201ENST00000422141 2135 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX3Q99909 AC073464.1-201ENST00000429823 534 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC000111.3-201ENST00000433478 193 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC107083.1-201ENST00000439643 279 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 MTND1P18-201ENST00000448191 573 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC131571.1-202ENST00000454509 598 ntTSL 4 BASIC2.37□□□□□ -2.03
SSX3Q99909 TPT1P7-201ENST00000458300 517 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC080013.2-201ENST00000460866 323 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 RN7SL297P-201ENST00000483161 293 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC096576.1-201ENST00000489014 359 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 SRI-210ENST00000490437 570 ntTSL 2 BASIC2.37□□□□□ -2.03
SSX3Q99909 HMGB1P30-201ENST00000492455 606 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC2.37□□□□□ -2.03
SSX3Q99909 SMURF2P1-201ENST00000514992 481 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 MIR892C-201ENST00000516410 77 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 OR5AQ1P-201ENST00000527596 927 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC2.37□□□□□ -2.03
SSX3Q99909 NDUFAF4P1-201ENST00000559425 519 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC025678.1-201ENST00000567861 338 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 MYL12BP1-201ENST00000569826 507 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 AL020991.1-201ENST00000612314 373 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC2.37□□□□□ -2.03
SSX3Q99909 uc_338.11-201ENST00000619132 160 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 AC092656.1-203ENST00000624134 423 ntBASIC2.37□□□□□ -2.03
SSX3Q99909 PROX1-AS1-244ENST00000630355 599 ntTSL 5 BASIC2.37□□□□□ -2.03
SSX3Q99909 IL33-202ENST00000417746 2327 ntTSL 2 BASIC2.37□□□□□ -2.03
SSX3Q99909 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSX3Q99909 QSER1-204ENST00000527788 5052 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX3Q99909 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX3Q99909 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC2.36□□□□□ -2.03
SSX3Q99909 RNU6-858P-201ENST00000362436 107 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 SNORA80A-201ENST00000363922 136 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 SNORA3A-201ENST00000364113 130 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 SNORA9.2-201ENST00000365361 133 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 RNU6-606P-201ENST00000384721 111 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 Y_RNA.582-201ENST00000391023 95 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 BTF3L4P1-201ENST00000413813 468 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX3Q99909 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX3Q99909 TOMM20P4-201ENST00000427861 435 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 AL138830.2-202ENST00000446358 786 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX3Q99909 MTCO2P18-201ENST00000457151 658 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 snoU109.2-201ENST00000459316 135 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 AC011005.2-201ENST00000487324 359 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.36□□□□□ -2.03
SSX3Q99909 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX3Q99909 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SSX3Q99909 CBX3P7-201ENST00000532876 502 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.36□□□□□ -2.03
SSX3Q99909 MTND1P15-201ENST00000579262 949 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 AC005304.3-201ENST00000581533 511 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX3Q99909 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX3Q99909 AC060766.3-201ENST00000591442 263 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 AC097065.2-201ENST00000608159 533 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC2.36□□□□□ -2.03
SSX3Q99909 ZNF680P1-201ENST00000436625 1469 ntBASIC2.36□□□□□ -2.03
SSX3Q99909 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSX3Q99909 ZNF117-204ENST00000620222 5317 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSX3Q99909 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX3Q99909 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX3Q99909 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2.35□□□□□ -2.03
SSX3Q99909 AL139276.1-201ENST00000311910 1001 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 Y_RNA.159-201ENST00000363674 87 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 SNORA5B-201ENST00000363786 132 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 RNU6-72P-201ENST00000384285 79 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 MIR181A2-201ENST00000384863 110 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 MIR524-201ENST00000385242 87 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 FTH1P15-201ENST00000406984 280 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 U6atac.2-201ENST00000408644 118 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 RNU4-46P-201ENST00000410818 138 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AL663109.1-201ENST00000411498 844 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AL139132.1-201ENST00000431587 344 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AC002486.1-201ENST00000435098 391 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 CR769767.1-201ENST00000436337 346 ntBASIC2.35□□□□□ -2.03
SSX3Q99909 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC2.35□□□□□ -2.03
SSX3Q99909 AC117462.1-201ENST00000461186 554 ntTSL 4 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms