Protein–RNA interactions for Protein: Q96ST3

SIN3A, Paired amphipathic helix protein Sin3a, humanhuman

Predictions only

Length 1,273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3AQ96ST3 FGF7P6-202ENST00000451282 293 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC046136.1-201ENST00000459855 533 ntTSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC105417.1-201ENST00000514691 285 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 RNA5SP503-201ENST00000517047 117 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 ATP5F1P5-201ENST00000526403 760 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC105137.2-201ENST00000569073 466 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 MIR4703-201ENST00000577728 79 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC104237.2-201ENST00000612456 443 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AC007014.2-201ENST00000615581 479 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 AL354950.2-201ENST00000617939 290 ntBASIC3.22□□□□□ -1.89
SIN3AQ96ST3 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.22□□□□□ -1.89
SIN3AQ96ST3 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC3.21□□□□□ -1.89
SIN3AQ96ST3 AL049641.1-201ENST00000441055 1948 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.255-201ENST00000364581 97 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 SNORA67.3-201ENST00000384366 140 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNU6-387P-201ENST00000411331 105 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 MAMDC2-AS1-203ENST00000420573 339 ntTSL 3 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 MTCYBP5-201ENST00000423752 1135 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 MTCO1P20-201ENST00000425366 358 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL592045.1-201ENST00000429867 352 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL512844.2-201ENST00000433990 593 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 FABP5P15-201ENST00000453566 214 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNU6-261P-201ENST00000459506 102 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 PLCH1-AS2-201ENST00000472913 408 ntTSL 2 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 SUMO2P6-201ENST00000505273 288 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC104806.1-201ENST00000508720 308 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL117351.2-201ENST00000513571 157 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNU6ATAC9P-201ENST00000516210 116 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNU6-1281P-201ENST00000516223 105 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNU6-914P-201ENST00000516749 109 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 RNA5SP402-201ENST00000517148 110 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC109635.3-201ENST00000529536 185 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC010653.1-201ENST00000571108 881 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC136601.2-201ENST00000604356 474 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL158032.1-201ENST00000605401 106 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC107294.1-201ENST00000609524 467 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL359547.2-201ENST00000615810 418 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 U6.114-201ENST00000636407 96 ntBASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AP3S1-209ENST00000640413 489 ntTSL 5 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 ZGRF1-212ENST00000612287 2176 ntTSL 1 (best) BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 LRRC49-224ENST00000560691 2531 ntTSL 2 BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 SLC4A7-201ENST00000295736 7757 ntAPPRIS P3 TSL 1 (best) BASIC3.21□□□□□ -1.9
SIN3AQ96ST3 AL354685.2-201ENST00000448218 1447 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 SERPINI2-202ENST00000461846 1514 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.245-201ENST00000364493 95 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNU6-550P-201ENST00000391057 101 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RPS4XP3-201ENST00000398541 413 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AL445529.1-201ENST00000398713 389 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 USP9YP27-201ENST00000418455 438 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 TMEM167AP1-201ENST00000423409 219 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AL596276.1-201ENST00000434465 418 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AL136972.1-201ENST00000443471 351 ntTSL 3 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AC092567.1-201ENST00000452397 251 ntTSL 3 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNU1-41P-201ENST00000516161 162 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNU1-48P-201ENST00000516400 162 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNA5SP24-201ENST00000516478 95 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNU6-1282P-201ENST00000516735 96 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNA5SP290-201ENST00000517133 127 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 RNA5SP291-201ENST00000517222 105 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 LINC02546-202ENST00000528119 801 ntTSL 5 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 ADI1P3-201ENST00000549509 470 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 MIR5002-201ENST00000584713 97 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 MIR15A-201ENST00000607334 83 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AC064859.1-201ENST00000624741 174 ntBASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.2□□□□□ -1.9
SIN3AQ96ST3 AKAP9-202ENST00000358100 10309 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.38-201ENST00000362617 102 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RNU6-552P-201ENST00000362869 119 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 Y_RNA.248-201ENST00000364501 109 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RNU6-903P-201ENST00000391270 109 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 CISD1P1-201ENST00000393907 327 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RN7SKP223-201ENST00000410582 62 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 RNA5SP508-201ENST00000411327 119 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 OR6C66P-201ENST00000414917 930 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 LINC01626-201ENST00000431997 452 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC000111.3-201ENST00000433478 193 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AL157882.1-201ENST00000447148 429 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 MTND1P18-201ENST00000448191 573 ntBASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AL160162.1-201ENST00000456715 442 ntTSL 3 BASIC3.19□□□□□ -1.9
SIN3AQ96ST3 AC092989.1-201ENST00000481235 277 ntBASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 124.1 ms