Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 AL138963.2-201ENST00000605137 226 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC021646.1-201ENST00000605469 484 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC008945.2-201ENST00000606056 604 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC008536.2-201ENST00000607284 349 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC096772.1-201ENST00000609146 564 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 DLEU2_1.1-201ENST00000612089 120 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 AC091834.1-201ENST00000614543 472 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 DLEU2_1.2-201ENST00000614667 120 ntBASIC2.56□□□□□ -2
RAB3IPQ96QF0 LINC01090-203ENST00000632331 466 ntTSL 5 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 CFH-202ENST00000367429 4127 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
RAB3IPQ96QF0 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC2.56□□□□□ -2
RAB3IPQ96QF0 OR51A4-202ENST00000641898 4393 ntAPPRIS P1 BASIC2.56□□□□□ -2
RAB3IPQ96QF0 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 MIR208A-201ENST00000362287 71 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 RNA5SP374-201ENST00000362939 125 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 Y_RNA.359-201ENST00000365498 102 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 RNU6-843P-201ENST00000384454 104 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 MIR144-201ENST00000384886 86 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 TRDJ3-201ENST00000390476 59 ntAPPRIS P1 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC006020.1-201ENST00000420179 1854 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC006946.1-201ENST00000429106 328 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC022018.1-201ENST00000430685 241 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 HMGB1P31-201ENST00000437242 427 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AL360221.1-201ENST00000445989 335 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 OFD1P4Y-201ENST00000455273 1179 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC004930.1-201ENST00000470677 254 ntTSL 2 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 AP005902.1-201ENST00000521358 186 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 BNIP3P6-201ENST00000549284 499 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AL133241.1-201ENST00000556832 487 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 MIR5195-201ENST00000583555 115 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC006504.5-204ENST00000592404 765 ntTSL 3 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC073648.5-201ENST00000603502 305 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 AC009233.1-201ENST00000616477 371 ntBASIC2.55□□□□□ -2
RAB3IPQ96QF0 WARS-244ENST00000627608 123 ntTSL 5 BASIC2.55□□□□□ -2
RAB3IPQ96QF0 CUL3-203ENST00000409096 2701 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB3IPQ96QF0 OR4G2P-201ENST00000328113 903 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 RNU1-72P-201ENST00000362976 153 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC009158.1-206ENST00000417476 454 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 LINC02559-201ENST00000420391 188 ntTSL 2 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 EIF4EP4-201ENST00000424916 578 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 INTS6L-AS1-201ENST00000430820 398 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AL365400.1-201ENST00000431854 640 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC007285.2-201ENST00000433088 518 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC112220.1-201ENST00000434628 355 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC092436.1-201ENST00000506450 503 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AF213884.2-201ENST00000510417 903 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC107222.1-201ENST00000510899 637 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 GTF2H2C-212ENST00000512736 832 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC074344.1-201ENST00000512823 224 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC104136.1-201ENST00000512969 394 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC008885.1-201ENST00000514930 301 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 SCGB1D5P-201ENST00000515134 247 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 SNORA74D-201ENST00000516404 141 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 SNORA43.2-201ENST00000516652 128 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 FAM92A-209ENST00000519679 538 ntTSL 4 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 CR383656.8-201ENST00000549046 145 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AL136038.2-201ENST00000553983 283 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC136619.2-201ENST00000563361 631 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 MIR4703-201ENST00000577728 79 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 RN7SKP299-201ENST00000606679 301 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC022017.1-201ENST00000608793 559 ntTSL 4 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 ZNRD1-AS1_2.5-201ENST00000614729 76 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 C3orf49-203ENST00000616659 876 ntAPPRIS ALT2 TSL 5 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 AC136475.10-201ENST00000620253 385 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 MIR8057-201ENST00000620957 69 ntBASIC2.54□□□□□ -2
RAB3IPQ96QF0 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC2.54□□□□□ -2
RAB3IPQ96QF0 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.54□□□□□ -2
RAB3IPQ96QF0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
RAB3IPQ96QF0 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 RNU1-52P-201ENST00000384190 164 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 RNU2-63P-201ENST00000410792 194 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 RNU6-607P-201ENST00000411283 108 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC007064.1-201ENST00000412238 351 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 USP9YP27-201ENST00000418455 438 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC069542.1-201ENST00000445235 557 ntTSL 3 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 AL138900.1-201ENST00000449345 399 ntTSL 3 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 AL118520.1-201ENST00000450770 291 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 AC008526.1-201ENST00000509149 338 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
RAB3IPQ96QF0 RN7SKP298-201ENST00000515950 94 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 RPL7P20-201ENST00000520308 745 ntBASIC2.53□□□□□ -2
RAB3IPQ96QF0 UBE2Q2P8-201ENST00000560644 102 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 123.2 ms