Protein–RNA interactions for Protein: Q96M19

LINC00477, Putative transmembrane protein encoded by LINC00477, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00477Q96M19 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 MGC32805-203ENST00000506053 652 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC091133.4-201ENST00000511142 308 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 LINC01256-201ENST00000513270 508 ntTSL 2 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 RNU2-10P-201ENST00000516375 211 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RNU6-703P-201ENST00000516946 107 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 MTCO2P4-201ENST00000517968 247 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC025755.1-201ENST00000521306 278 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 IGHVIII-5-1-201ENST00000523059 99 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 FAM92A1P1-201ENST00000528023 890 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC021269.2-201ENST00000532318 330 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 EIF4BP1-201ENST00000554881 351 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL138976.2-201ENST00000563989 694 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 NBR2-204ENST00000587322 63 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC098848.2-201ENST00000588023 330 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC008752.3-201ENST00000588113 712 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC087683.1-201ENST00000591187 441 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC006023.1-201ENST00000603944 259 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC104763.2-201ENST00000604179 382 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC007621.1-201ENST00000604544 437 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL158032.1-201ENST00000605401 106 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL121917.1-203ENST00000605534 577 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL161423.1-201ENST00000613700 262 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AP001486.3-201ENST00000615334 372 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC108479.2-201ENST00000617314 601 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 HIKESHI-208ENST00000618164 499 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC010378.1-201ENST00000619270 362 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC068792.1-201ENST00000621354 417 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC007998.5-201ENST00000622938 237 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC025034.2-201ENST00000623264 286 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 AC138627.2-201ENST00000624202 601 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 AL157786.1-207ENST00000627771 695 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 KPNA2P1-201ENST00000458289 1591 ntBASIC1.75□□□□□ -2.13
LINC00477Q96M19 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC00477Q96M19 ZMYM1-203ENST00000373330 4203 ntAPPRIS P1 TSL 1 (best) BASIC1.75□□□□□ -2.13
LINC00477Q96M19 ESF1-202ENST00000617257 1470 ntTSL 5 BASIC1.75□□□□□ -2.13
LINC00477Q96M19 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 SNORA5B-201ENST00000363786 132 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 RNA5SP68-201ENST00000363885 119 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 RNU6-1303P-201ENST00000364841 107 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 SNORD115-7-201ENST00000365306 82 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 RNU1-73P-201ENST00000383971 164 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 RNU6-190P-201ENST00000384154 102 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 Y_RNA.559-201ENST00000384686 107 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 MIR518C-201ENST00000384822 101 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 MIR17-201ENST00000385012 84 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 RNU6-817P-201ENST00000391083 104 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL591416.1-201ENST00000404015 867 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 Z92545.1-201ENST00000411782 234 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL109913.1-201ENST00000421173 514 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 HMGN2P38-201ENST00000423806 265 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC133104.1-201ENST00000429100 218 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 DNAJC19P4-201ENST00000440115 345 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC098831.1-201ENST00000440661 216 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 SNORA31.6-201ENST00000516241 130 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 SNORD27.1-201ENST00000516319 72 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 OR5AL2P-201ENST00000532185 920 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 SUB1P2-201ENST00000556401 297 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 MIR4775-201ENST00000581168 75 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC073539.2-201ENST00000597113 165 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.6-201ENST00000603753 252 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.11-201ENST00000604059 253 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AC008162.1-201ENST00000604718 254 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.1-201ENST00000604752 252 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.5-201ENST00000605253 252 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.12-201ENST00000605291 253 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.8-201ENST00000605353 252 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL670379.7-201ENST00000605823 252 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 AL031601.2-202ENST00000622650 282 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 MTND5P29-201ENST00000458676 1807 ntBASIC1.74□□□□□ -2.13
LINC00477Q96M19 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC1.74□□□□□ -2.13
LINC00477Q96M19 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.74□□□□□ -2.13
LINC00477Q96M19 MTND5P26-201ENST00000426018 1752 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 AC005336.3-201ENST00000623833 2679 ntBASIC1.73□□□□□ -2.13
LINC00477Q96M19 OR4G2P-201ENST00000328113 903 ntBASIC1.73□□□□□ -2.13
Retrieved 100 of 98,524 protein–RNA pairs in 102.2 ms