Protein–RNA interactions for Protein: Q96JB5

CDK5RAP3, CDK5 regulatory subunit-associated protein 3, humanhuman

Predictions only

Length 506 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3Q96JB5 RPL32P35-201ENST00000415214 394 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AL353729.1-201ENST00000425044 720 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 HMGB1P9-201ENST00000429856 646 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 RN7SL442P-201ENST00000473804 320 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.682-201ENST00000516457 100 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-1332P-201ENST00000516666 104 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-703P-201ENST00000516946 107 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 SNORA31.21-201ENST00000517180 77 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AC087854.1-201ENST00000519706 414 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 MIR4782-201ENST00000577987 79 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AL355598.1-201ENST00000604169 202 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AL132765.2-201ENST00000610812 351 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AC104237.2-201ENST00000612456 443 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 U2.21-201ENST00000637295 81 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 AC010680.1-201ENST00000590024 3590 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 MTND4P29-201ENST00000503122 1372 ntBASIC3.62□□□□□ -1.83
CDK5RAP3Q96JB5 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC091564.4-201ENST00000533934 2194 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP383-201ENST00000362934 120 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-778P-201ENST00000363269 103 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC007314.1-201ENST00000414538 565 ntTSL 4 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 NCOR1P3-201ENST00000420479 303 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 SKA2P1-201ENST00000425592 390 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 NDUFB1P2-201ENST00000449477 176 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AMD1P1-201ENST00000457220 922 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 RPS27P29-201ENST00000463110 252 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP217-201ENST00000515959 91 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC104027.1-201ENST00000521887 300 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC025423.5-201ENST00000550230 219 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 ZFP30-209ENST00000589018 444 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 ZNF667-AS1-209ENST00000601875 495 ntTSL 3 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AL645944.1-201ENST00000603857 493 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 APOOP1-201ENST00000604695 592 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 MTND4LP5-201ENST00000605152 292 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-85P-201ENST00000605989 107 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AL591516.1-201ENST00000611326 274 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AC009233.1-201ENST00000616477 371 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AL359314.1-201ENST00000616913 261 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 HOTAIRM1_5.1-201ENST00000619311 145 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 AL359697.1-201ENST00000624879 587 ntBASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 DDX6-206ENST00000534980 4538 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.61□□□□□ -1.83
CDK5RAP3Q96JB5 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.61-201ENST00000362835 102 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RNU4-73P-201ENST00000363164 141 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RNU1-73P-201ENST00000383971 164 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RPL26P27-201ENST00000414397 437 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 TOMM20P4-201ENST00000427861 435 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RPL37P4-201ENST00000448908 268 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RNU7-138P-201ENST00000459479 64 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RN7SL601P-201ENST00000471221 293 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 RNU6-566P-201ENST00000516790 107 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 SNORA31.26-201ENST00000517250 137 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 NCRNA00250-201ENST00000519500 519 ntTSL 4 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 AC087045.1-201ENST00000605856 382 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 uc_338.25-201ENST00000613756 156 ntBASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 PRKG2-206ENST00000545647 3852 ntTSL 5 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.6□□□□□ -1.83
CDK5RAP3Q96JB5 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 SNORD56.3-201ENST00000363507 71 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 Y_RNA.212-201ENST00000364177 102 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RNA5SP139-201ENST00000364340 117 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 GSTA3-202ENST00000370968 775 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 MIR34A-201ENST00000385130 110 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL357075.1-201ENST00000404107 726 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC006028.1-201ENST00000438379 402 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RPL32P28-201ENST00000443577 397 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL358232.1-201ENST00000448030 501 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 MTATP6P7-201ENST00000453315 681 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RPL26P9-201ENST00000457466 433 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RPS29P12-201ENST00000460178 152 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RPS29P20-201ENST00000489592 171 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AL627309.4-201ENST00000496488 457 ntTSL 5 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 FGF7P4-201ENST00000509595 295 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 LINC02269-201ENST00000509968 511 ntTSL 3 BASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 RAC1P5-201ENST00000512182 576 ntBASIC3.59□□□□□ -1.83
CDK5RAP3Q96JB5 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC3.59□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 101.7 ms