Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 AC110491.1-201ENST00000562191 2010 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 AC092435.3-201ENST00000565538 3654 ntBASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 BAZ2B-202ENST00000343439 2364 ntTSL 5 BASIC3.8□□□□□ -1.8
CHMP4CQ96CF2 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 ADAM3A-203ENST00000461344 2157 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AL353743.1-202ENST00000431724 1695 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 CBX3P1-201ENST00000325243 554 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 SNORA14A-201ENST00000364773 135 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 RNU6-384P-201ENST00000364900 104 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 Y_RNA.303-201ENST00000364998 94 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 RNU6-510P-201ENST00000391239 108 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 FAM206BP-201ENST00000510179 541 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AC068657.1-201ENST00000520807 306 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 LINC00933-203ENST00000559812 219 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 UBL5P2-201ENST00000583788 219 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AL357078.3-201ENST00000607528 618 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AL121757.2-201ENST00000611223 313 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AL162274.2-201ENST00000614406 332 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AL008636.1-201ENST00000625038 1018 ntBASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC3.79□□□□□ -1.8
CHMP4CQ96CF2 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 Y_RNA.167-201ENST00000363735 109 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 Y_RNA.279-201ENST00000364763 95 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 RNU6-767P-201ENST00000384132 107 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 EIF4EBP2P3-201ENST00000403144 334 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 RAP1BP3-201ENST00000407180 549 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 BPY2DP-201ENST00000422208 265 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AL353678.1-201ENST00000422735 741 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 RPL35AP12-201ENST00000425362 338 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AL024508.1-201ENST00000432477 505 ntTSL 2 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AL135923.2-201ENST00000435444 501 ntTSL 2 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 NDUFA5P4-201ENST00000436704 385 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 PMCHL2-203ENST00000457791 237 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 RN7SL863P-201ENST00000462370 296 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AC006445.1-201ENST00000491925 405 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 TRBVA-201ENST00000498804 316 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AC008871.1-201ENST00000510935 398 ntTSL 3 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 SNORA25.17-201ENST00000517184 124 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AC090136.1-201ENST00000520009 240 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 NUTF2P8-201ENST00000604593 363 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 CTHRC1P1-201ENST00000605383 469 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 AC009248.2-201ENST00000619826 254 ntBASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 IL33-203ENST00000456383 2501 ntTSL 5 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CHMP4CQ96CF2 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 Y_RNA.414-201ENST00000384011 101 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 U3.19-201ENST00000390893 196 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC010974.1-201ENST00000450509 374 ntTSL 3 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC114501.3-201ENST00000453648 164 ntTSL 5 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 RNA5SP341-201ENST00000516261 117 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 RNU6-323P-201ENST00000521915 107 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC107953.1-201ENST00000522216 297 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC087241.2-201ENST00000535801 324 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC243972.3-201ENST00000539655 198 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AL451007.1-201ENST00000595491 289 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 AC087045.1-201ENST00000605856 382 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 MIR3199-2-201ENST00000636243 86 ntBASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 CUL2-206ENST00000421317 2376 ntTSL 2 BASIC3.77□□□□□ -1.81
CHMP4CQ96CF2 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 MIR148B-201ENST00000362252 99 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RNU6-898P-201ENST00000365627 104 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 SNORA48.5-201ENST00000391143 135 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RPS15AP5-201ENST00000436276 388 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC098831.1-201ENST00000440661 216 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC087884.1-201ENST00000469738 328 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC117503.1-201ENST00000472241 394 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 BMPR1B-AS1-201ENST00000510795 511 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RNU1-143P-201ENST00000516296 146 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RNA5SP380-201ENST00000517190 98 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RN7SKP256-201ENST00000517201 314 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC099554.1-201ENST00000520032 572 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC245166.1-201ENST00000521012 253 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AP001318.2-201ENST00000533378 492 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 MIR2682-201ENST00000580305 110 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AC011471.1-201ENST00000585766 187 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 AL160281.1-201ENST00000605307 311 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 U1.23-201ENST00000610293 146 ntBASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
CHMP4CQ96CF2 RNU1-68P-201ENST00000615382 146 ntBASIC3.76□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 98.3 ms