Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 SNORA71.1-201ENST00000364523 117 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 Y_RNA.324-201ENST00000365165 102 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 Y_RNA.356-201ENST00000365475 113 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 RNU6-658P-201ENST00000384606 106 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 MIR34A-201ENST00000385130 110 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AL445529.1-201ENST00000398713 389 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AL356432.1-201ENST00000405809 419 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 MIR1261-201ENST00000408659 82 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 RN7SKP220-201ENST00000410611 288 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC099548.1-201ENST00000421443 426 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AL353729.1-201ENST00000425044 720 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AL139132.1-201ENST00000431587 344 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 MRPL50P4-201ENST00000446432 475 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC108938.1-201ENST00000451204 136 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC092798.1-201ENST00000458542 409 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC117503.1-201ENST00000472241 394 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC011005.2-201ENST00000487324 359 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC103851.1-201ENST00000506833 274 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC113383.1-204ENST00000507060 552 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 MTND3P22-201ENST00000510932 243 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 RNU1-86P-201ENST00000516108 154 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 RNU1-107P-201ENST00000516617 154 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 RNU6-256P-201ENST00000516747 97 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 SNORA25.17-201ENST00000517184 124 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC087854.1-201ENST00000519706 414 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AP000889.2-201ENST00000532684 490 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 DAOA-AS1_2.1-201ENST00000614829 187 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC022149.2-201ENST00000621061 203 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 TPTEP1-208ENST00000636884 213 ntBASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TRIM43Q96BQ3 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AL513302.2-201ENST00000562313 1842 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 PALMD-205ENST00000615664 1844 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU4-82P-201ENST00000362443 140 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU6-797P-201ENST00000363101 109 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU6-270P-201ENST00000364131 105 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 SNORD14B-201ENST00000364533 90 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU6-283P-201ENST00000364788 107 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU1-73P-201ENST00000383971 164 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU6-166P-201ENST00000384371 107 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 MIR10A-201ENST00000385043 110 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AL356057.2-201ENST00000403318 432 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RNU2-3P-201ENST00000410144 191 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 CYCSP33-201ENST00000414485 327 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 KRTAP19-11P-201ENST00000439851 104 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 MTATP6P7-201ENST00000453315 681 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AC019155.3-201ENST00000454957 600 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AC087884.1-201ENST00000469738 328 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 MAGI1-AS1-201ENST00000472514 591 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AC008892.1-201ENST00000511861 384 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 SNORA70.19-201ENST00000516717 90 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 NDUFB9P3-201ENST00000521269 501 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AC092120.1-201ENST00000562211 420 ntTSL 3 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 NUTF2P8-201ENST00000604593 363 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 RMST_7.1-201ENST00000621935 268 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 AC110774.1-201ENST00000623567 2018 ntBASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
TRIM43Q96BQ3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 EI24P2-201ENST00000397776 1076 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 RNA5SP38-201ENST00000410750 119 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 NDUFS5P4-201ENST00000412983 318 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AL592148.1-201ENST00000413568 445 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 VN1R36P-201ENST00000414936 291 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AL139281.1-201ENST00000422120 335 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 MTND3P23-201ENST00000431980 347 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AL135938.1-201ENST00000443141 297 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 RPL26P9-201ENST00000457466 433 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 snoU13.28-201ENST00000459235 104 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 RNU7-138P-201ENST00000459479 64 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AC128713.1-201ENST00000471495 306 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 RNU6-703P-201ENST00000516946 107 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 MIR4319-201ENST00000577285 85 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 MIR3942-201ENST00000585264 109 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 ELOCP29-201ENST00000588193 334 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 uc_338.1-201ENST00000612113 180 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 AL138880.2-201ENST00000616214 239 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 IGHVIII-44-202ENST00000636235 289 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 U2.21-201ENST00000637295 81 ntBASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 ACTR6-212ENST00000552376 1659 ntTSL 5 BASIC3.48□□□□□ -1.85
TRIM43Q96BQ3 SYNE1-201ENST00000341594 26584 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130.8 ms