Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 LINC01312-201ENST00000412745 775 ntTSL 3 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 EEF1A1P40-201ENST00000412883 573 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 AL135938.1-201ENST00000443141 297 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AL360271.2-201ENST00000447710 161 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 RNU7-182P-201ENST00000459009 62 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 SRIP1-201ENST00000489235 288 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 LINC02064-201ENST00000506492 470 ntTSL 5 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC107222.1-201ENST00000510899 637 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC104136.1-201ENST00000512969 394 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 SNORA18.6-201ENST00000516792 115 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC135279.1-201ENST00000543493 504 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC009269.3-201ENST00000558429 472 ntTSL 5 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC018554.1-202ENST00000565133 444 ntTSL 3 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 MIR4635-201ENST00000583759 79 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AL121917.1-203ENST00000605534 577 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC006566.1-201ENST00000608943 513 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 AC093648.1-201ENST00000623546 606 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 SEPT14P19-203ENST00000633205 211 ntBASIC2.37□□□□□ -2.03
PTP4A1Q93096 RGS13-204ENST00000543215 1518 ntAPPRIS P1 TSL 1 (best) BASIC2.37□□□□□ -2.03
PTP4A1Q93096 ARHGAP15-202ENST00000409869 2968 ntTSL 5 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.37□□□□□ -2.03
PTP4A1Q93096 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC080100.1-201ENST00000624239 5356 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 ZNF451-208ENST00000491832 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTP4A1Q93096 RNU6-7-201ENST00000364784 107 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 RNU6-8-201ENST00000365467 107 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 RNU6-116P-201ENST00000384042 109 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 OR9R1P-201ENST00000412200 877 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC093382.1-201ENST00000413311 379 ntTSL 5 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 MTND3P17-201ENST00000416968 344 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 USP9YP20-201ENST00000419224 558 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 PGBD4P6-201ENST00000421501 610 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 COTL1P1-201ENST00000422309 375 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AL445567.1-201ENST00000439121 144 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC107083.1-201ENST00000439643 279 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 UTAT33-202ENST00000449177 565 ntTSL 2 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 CACYBPP2-201ENST00000453625 678 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC091965.2-201ENST00000512324 613 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 SNORA43.2-201ENST00000516652 128 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 RNU7-193P-201ENST00000516723 65 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 LINC01195-201ENST00000570118 451 ntTSL 3 BASIC2.36□□□□□ -2.03
PTP4A1Q93096 MTCYBP33-201ENST00000575007 1130 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 SEPT7P9-203ENST00000604116 343 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AC098614.4-201ENST00000607601 462 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 AP001486.3-201ENST00000615334 372 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 RMST_4.1-201ENST00000616886 107 ntBASIC2.36□□□□□ -2.03
PTP4A1Q93096 SENP7-205ENST00000394091 4434 ntAPPRIS ALT2 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTP4A1Q93096 FAM214A-201ENST00000261844 4217 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
PTP4A1Q93096 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTP4A1Q93096 RNU6-655P-201ENST00000362858 107 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 RNU6-525P-201ENST00000363685 104 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 Y_RNA.367-201ENST00000365544 101 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 MIR454-201ENST00000390180 115 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 RNA5SP21-201ENST00000410917 96 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 RNU6-195P-201ENST00000411352 109 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AL031779.1-201ENST00000415663 330 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC074117.2-201ENST00000417130 397 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 MTND2P18-201ENST00000419962 1030 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 PCDH9-AS1-201ENST00000430861 532 ntTSL 2 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 RPL31P35-201ENST00000431058 377 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 HMGB1P31-201ENST00000437242 427 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC011816.1-201ENST00000441346 546 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 IPO7P1-201ENST00000442031 636 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC092802.2-202ENST00000444665 371 ntTSL 5 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 MTND1P27-201ENST00000451117 902 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC079140.5-201ENST00000507882 310 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 RNA5SP282-201ENST00000516355 108 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 IGLV3-17-201ENST00000519099 244 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AP001189.6-201ENST00000528781 831 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTP4A1Q93096 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC079600.2-201ENST00000550076 130 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 PRELID2P1-201ENST00000552837 301 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC026271.5-201ENST00000577873 130 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 MIR4529-201ENST00000578110 78 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 LARP7P3-201ENST00000579888 337 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC020910.1-201ENST00000599404 413 ntTSL 5 BASIC2.35□□□□□ -2.03
PTP4A1Q93096 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
PTP4A1Q93096 MIR6895-201ENST00000613497 78 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 AC002543.1-201ENST00000299783 1954 ntBASIC2.35□□□□□ -2.03
PTP4A1Q93096 FGF7-201ENST00000267843 5467 ntAPPRIS P1 TSL 1 (best) BASIC2.35□□□□□ -2.03
PTP4A1Q93096 OR8K3-204ENST00000641689 2380 ntAPPRIS P1 BASIC2.35□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms