Protein–RNA interactions for Protein: Q8TB33

LINC01560, Putative uncharacterized protein encoded by LINC01560, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01560Q8TB33 AL603755.1-201ENST00000619504 163 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC1.72□□□□□ -2.13
LINC01560Q8TB33 AC244517.12-201ENST00000623581 663 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 AC120349.3-201ENST00000624377 529 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 AL603839.4-201ENST00000624658 1005 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 AC025048.6-202ENST00000627667 438 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 ANKRD36BP1-202ENST00000604892 1417 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 MTND4P27-201ENST00000450813 1354 ntBASIC1.72□□□□□ -2.13
LINC01560Q8TB33 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AP000568.1-201ENST00000282964 442 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC073343.1-201ENST00000328239 651 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.22-201ENST00000362492 102 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 U8.3-201ENST00000363321 132 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 RNU6-166P-201ENST00000384371 107 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC005062.1-206ENST00000424516 710 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 PTGES3P4-201ENST00000426243 356 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MTCO3P30-201ENST00000426425 670 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC007560.1-201ENST00000426912 237 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC137499.1-201ENST00000427602 88 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL592466.1-201ENST00000428346 307 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MICF-203ENST00000432679 129 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC104850.1-201ENST00000435940 476 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL359853.2-201ENST00000442108 353 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL137847.2-201ENST00000458111 527 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 RNU7-26P-201ENST00000458980 63 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AP001324.2-201ENST00000461163 319 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 OARD1-209ENST00000471367 401 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL359273.1-202ENST00000505585 905 ntTSL 1 (best) BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC116655.1-201ENST00000508324 901 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 VCAN-AS1-201ENST00000512090 424 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC025524.1-201ENST00000518489 606 ntTSL 4 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 DUXAP5-201ENST00000529668 529 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 LINC00933-203ENST00000559812 219 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC023824.2-201ENST00000566185 400 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC145350.1-201ENST00000567426 208 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MIR1273C-201ENST00000578669 77 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MIR5089-201ENST00000580047 84 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC007948.1-201ENST00000581632 242 ntTSL 5 BASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MIR3616-201ENST00000584070 92 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 MIR5002-201ENST00000584713 97 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC005771.1-201ENST00000585581 349 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL021997.1-201ENST00000605757 193 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AL137847.3-201ENST00000611521 109 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 HMGB1P24-202ENST00000615653 685 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 AC093536.2-201ENST00000565257 1406 ntBASIC1.71□□□□□ -2.14
LINC01560Q8TB33 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.33-201ENST00000362591 102 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 Y_RNA.338-201ENST00000365320 114 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 RGS18-201ENST00000367460 2150 ntAPPRIS P1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 MIR558-201ENST00000384920 94 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 MT-TH-201ENST00000387441 69 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 RPS3AP36-201ENST00000398190 775 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AL031779.1-201ENST00000415663 330 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 USP9YP27-201ENST00000418455 438 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AL162726.4-201ENST00000422010 673 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC064852.1-201ENST00000427571 851 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 RPL30P4-201ENST00000429309 333 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 RPS24P1-201ENST00000438550 371 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC003989.2-201ENST00000440224 169 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AL022238.1-201ENST00000442557 355 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AL078601.1-201ENST00000444542 271 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AL158210.1-201ENST00000448835 500 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC104435.1-201ENST00000483483 166 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 MTAPP1-201ENST00000489154 819 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC104564.1-201ENST00000493028 407 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC023194.1-201ENST00000493084 308 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AKIRIN2P1-201ENST00000505898 352 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC108078.2-201ENST00000510750 236 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 RNA5SP82-201ENST00000516707 92 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 SKP1-203ENST00000517625 876 ntAPPRIS P4 TSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC008662.2-201ENST00000522426 389 ntTSL 5 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC025678.1-201ENST00000567861 338 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 MYL12BP1-201ENST00000569826 507 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 BNIP3P8-201ENST00000597863 560 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AP000942.3-201ENST00000603702 160 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AC126118.1-201ENST00000607744 628 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 AP000770.2-201ENST00000623694 100 ntBASIC1.7□□□□□ -2.14
LINC01560Q8TB33 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC1.7□□□□□ -2.14
LINC01560Q8TB33 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC1.7□□□□□ -2.14
Retrieved 100 of 98,524 protein–RNA pairs in 127.5 ms