Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 MTND3P25-201ENST00000509243 135 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 HIGD1AP13-201ENST00000509878 289 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 RN7SKP219-201ENST00000516825 296 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC023632.4-201ENST00000517783 191 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 OR5AQ1P-201ENST00000527596 927 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 FAM92A1P1-201ENST00000528023 890 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC022960.1-201ENST00000582269 348 ntTSL 3 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 MIR3117-201ENST00000584034 78 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 MIR3616-201ENST00000584070 92 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC138627.2-201ENST00000624202 601 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 U6.105-201ENST00000637379 88 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AP000553.5-201ENST00000641933 54 ntBASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC128685.1-201ENST00000490357 1834 ntTSL 5 BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 LMBRD1-201ENST00000370570 2099 ntTSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 KIF20B-202ENST00000371728 6419 ntAPPRIS ALT2 TSL 1 (best) BASIC2.35□□□□□ -2.03
CCDC197Q8NCU1 AC069528.2-201ENST00000624849 1991 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MTND5P26-201ENST00000426018 1752 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MIR422A-201ENST00000362286 90 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 RNU6-942P-201ENST00000363002 107 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 Y_RNA.194-201ENST00000363985 102 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 RNU6-715P-201ENST00000365204 103 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MIR9-1-201ENST00000385198 89 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 RPS4XP7-201ENST00000406274 780 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 RNU2-3P-201ENST00000410144 191 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 HMGB3P2-201ENST00000411913 584 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MORF4L1P6-201ENST00000418771 268 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 Z82209.1-201ENST00000422141 2135 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MTCO3P30-201ENST00000426425 670 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AL589986.2-201ENST00000429352 397 ntTSL 2 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC002486.1-201ENST00000435098 391 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC092573.2-202ENST00000437243 336 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 HIGD1AP2-201ENST00000446367 280 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 HMGB1P30-201ENST00000492455 606 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 HMGB3P3-201ENST00000510526 400 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MTND3P5-201ENST00000512798 333 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 MIR892C-201ENST00000516410 77 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC135279.1-201ENST00000543493 504 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 LRRC37A5P-203ENST00000580181 585 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC008752.3-201ENST00000588113 712 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC078795.2-201ENST00000602835 1252 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AL356280.1-201ENST00000603614 379 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AC008536.2-201ENST00000607284 349 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 AL160394.1-201ENST00000624765 724 ntBASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 FTO-223ENST00000640179 210 ntTSL 5 BASIC2.34□□□□□ -2.03
CCDC197Q8NCU1 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL359854.1-201ENST00000614203 1594 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 Y_RNA.1-201ENST00000352915 104 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 S100A12-201ENST00000368737 518 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 OR5H15-201ENST00000383696 930 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 RNU6-1042P-201ENST00000384204 107 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 RNU6-45P-201ENST00000384471 107 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 Y_RNA.559-201ENST00000384686 107 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MIR183-201ENST00000384958 110 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MIR34A-201ENST00000385130 110 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MDM2-208ENST00000393410 732 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MDM2-210ENST00000393413 657 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 DEFB130A-201ENST00000400079 240 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 RNU6-607P-201ENST00000411283 108 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC016907.1-201ENST00000419483 435 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL353193.1-201ENST00000421444 268 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 DEFB130B-201ENST00000437818 240 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 DNAJC19P4-201ENST00000440115 345 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC104389.3-201ENST00000445629 235 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 snoU109.2-201ENST00000459316 135 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 Z84488.1-201ENST00000476099 530 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 RPL23AP45-201ENST00000476406 468 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MRPL42P6-201ENST00000486397 371 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC079804.2-201ENST00000490376 200 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC104136.1-201ENST00000512969 394 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC105417.1-201ENST00000514691 285 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC022784.2-201ENST00000521298 328 ntTSL 2 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AP004607.1-201ENST00000524456 203 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC079600.2-201ENST00000550076 130 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC121758.2-201ENST00000553271 193 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 MIR4658-201ENST00000584344 65 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL670379.10-201ENST00000604330 253 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 ATP1B3P1-201ENST00000605365 821 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AL670379.9-201ENST00000605428 253 ntBASIC2.33□□□□□ -2.04
CCDC197Q8NCU1 AC104073.3-201ENST00000610942 955 ntBASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 110.3 ms