Protein–RNA interactions for Protein: Q8NA47

CCDC63, Coiled-coil domain-containing protein 63, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC63Q8NA47 COX6CP5-201ENST00000527162 228 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 NTS-203ENST00000551529 801 ntTSL 3 BASIC2.56□□□□□ -2
CCDC63Q8NA47 AL512791.1-201ENST00000555853 300 ntTSL 3 BASIC2.56□□□□□ -2
CCDC63Q8NA47 LINC00933-203ENST00000559812 219 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AC234778.2-201ENST00000566241 354 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 SRGNP1-201ENST00000603392 451 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AL138889.2-201ENST00000603883 242 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AC008945.2-201ENST00000606056 604 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AC008536.2-201ENST00000607284 349 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AC017083.3-201ENST00000609955 700 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 MIR6075-201ENST00000620782 95 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 MIR7515-201ENST00000637837 67 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 PRB2-201ENST00000389362 1429 ntAPPRIS P2 TSL 5 BASIC2.56□□□□□ -2
CCDC63Q8NA47 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC2.56□□□□□ -2
CCDC63Q8NA47 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.56□□□□□ -2
CCDC63Q8NA47 AC010329.5-201ENST00000623497 2174 ntBASIC2.56□□□□□ -2
CCDC63Q8NA47 AK9-203ENST00000368948 2478 ntTSL 5 BASIC2.56□□□□□ -2
CCDC63Q8NA47 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCDC63Q8NA47 DEFB107A-201ENST00000335021 389 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC63Q8NA47 DEFB107B-201ENST00000355602 389 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
CCDC63Q8NA47 RNU6-1179P-201ENST00000384667 107 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 RNU6-1072P-201ENST00000384703 107 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 RNU6-443P-201ENST00000384780 107 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AL162578.1-201ENST00000406202 378 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 RNU6-1328P-201ENST00000410938 106 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AL627311.1-201ENST00000431514 115 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC2.55□□□□□ -2
CCDC63Q8NA47 PLCXD2-AS1-201ENST00000493131 491 ntTSL 3 BASIC2.55□□□□□ -2
CCDC63Q8NA47 HIGD1AP13-201ENST00000509878 289 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC087241.2-201ENST00000535801 324 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.55□□□□□ -2
CCDC63Q8NA47 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.55□□□□□ -2
CCDC63Q8NA47 MYL12BP1-201ENST00000569826 507 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC007151.1-201ENST00000572774 483 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AL158209.2-201ENST00000619266 216 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC005336.3-201ENST00000623833 2679 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC124864.2-201ENST00000624736 186 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AC006355.2-201ENST00000629240 317 ntTSL 3 BASIC2.55□□□□□ -2
CCDC63Q8NA47 MIR6863-201ENST00000636112 90 ntBASIC2.55□□□□□ -2
CCDC63Q8NA47 AGL-204ENST00000370161 6923 ntTSL 5 BASIC2.55□□□□□ -2
CCDC63Q8NA47 CEP44-203ENST00000426172 3037 ntTSL 5 BASIC2.55□□□□□ -2
CCDC63Q8NA47 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC2.55□□□□□ -2
CCDC63Q8NA47 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC63Q8NA47 RNU6-715P-201ENST00000365204 103 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 Y_RNA.409-201ENST00000383990 98 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 RNU6-903P-201ENST00000391270 109 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 CALM2P3-201ENST00000400429 449 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 RNU4-46P-201ENST00000410818 138 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AL353621.1-201ENST00000418219 243 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AL445687.1-201ENST00000439946 251 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AL359771.1-201ENST00000441809 379 ntTSL 5 BASIC2.54□□□□□ -2
CCDC63Q8NA47 GMFBP1-201ENST00000467831 427 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AC107401.1-201ENST00000503426 685 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC2.54□□□□□ -2
CCDC63Q8NA47 AC116655.1-201ENST00000508324 901 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 MTND3P25-201ENST00000509243 135 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AC105417.1-201ENST00000514691 285 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC2.54□□□□□ -2
CCDC63Q8NA47 AC100768.1-201ENST00000525512 506 ntTSL 3 BASIC2.54□□□□□ -2
CCDC63Q8NA47 AC022039.1-201ENST00000527110 488 ntTSL 2 BASIC2.54□□□□□ -2
CCDC63Q8NA47 AC022880.1-201ENST00000534017 973 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AC092325.1-201ENST00000566449 554 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 LINC01290-201ENST00000566787 502 ntTSL 2 BASIC2.54□□□□□ -2
CCDC63Q8NA47 MIR3117-201ENST00000584034 78 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 BNIP3P30-201ENST00000601184 574 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AP001330.5-201ENST00000607176 411 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AC087241.4-201ENST00000612441 480 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 MIR6895-201ENST00000613497 78 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 uc_338.11-201ENST00000619132 160 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC2.54□□□□□ -2
CCDC63Q8NA47 ZNF280D-204ENST00000558320 3666 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC63Q8NA47 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
CCDC63Q8NA47 Z82209.1-201ENST00000422141 2135 ntBASIC2.54□□□□□ -2
CCDC63Q8NA47 PHTF2-202ENST00000275575 4541 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCDC63Q8NA47 LINC00305-201ENST00000323355 873 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCDC63Q8NA47 SNORD62.1-201ENST00000362541 86 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 RNU6-552P-201ENST00000362869 119 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AL356057.3-201ENST00000402607 340 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 CIR1P3-201ENST00000405137 479 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 RNU2-3P-201ENST00000410144 191 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AL138962.1-201ENST00000417987 411 ntTSL 5 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AL445123.1-201ENST00000422023 446 ntTSL 2 BASIC2.53□□□□□ -2
CCDC63Q8NA47 MTCYBP8-201ENST00000422855 651 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC004383.1-201ENST00000438135 289 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC073415.1-201ENST00000449240 153 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 FDX1P2-201ENST00000450769 375 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 BTF3P15-201ENST00000455606 336 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 RNU7-63P-201ENST00000459054 62 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC011005.2-201ENST00000487324 359 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 LNX1-AS1-202ENST00000510785 550 ntTSL 2 BASIC2.53□□□□□ -2
CCDC63Q8NA47 LNX1-AS1-203ENST00000511989 488 ntTSL 2 BASIC2.53□□□□□ -2
CCDC63Q8NA47 VCAN-AS1-202ENST00000513899 453 ntTSL 3 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AC108067.1-201ENST00000514304 215 ntTSL 5 BASIC2.53□□□□□ -2
CCDC63Q8NA47 RNA5SP282-201ENST00000516355 108 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 RNA5SP82-201ENST00000516707 92 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC2.53□□□□□ -2
CCDC63Q8NA47 AP003034.1-201ENST00000534621 422 ntBASIC2.53□□□□□ -2
CCDC63Q8NA47 AC135279.1-201ENST00000543493 504 ntBASIC2.53□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 148.8 ms